BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZC01RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1774 1189 0.0 >3x_Contig1774 Length = 27771 Score = 1189 bits (600), Expect = 0.0 Identities = 689/716 (96%), Gaps = 2/716 (0%) Strand = Plus / Minus Query: 49 gggtcaaatctctgctggtatcgttgctctggttttggttgctgcttacaagggtgattt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1352 gggtcaaatctctgctggtatcgttgctctggttttggttgctgcttacaagggtgattt 1293 Query: 109 ggaagatgctaccactggtaactgtggtccagcttgtcaaaaggcatgtgatcaaatgtg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1292 ggaagatgctaccactggtaactgtggtccagcttgtcaaaaggcatgtgatcaaatgtg 1233 Query: 169 gagaatcttgatcggtttgggttgtttaccaggttgtattgctctatacttcatattgac 228 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1232 gagaatcttgatcggtttgggttgtttaccaggttgtattgctctatacttcagattgac 1173 Query: 229 tatcccagaatccccacgttataccttggatgtcgacatggacttcaacaagggtgctgc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1172 tatcccagaatccccacgttataccttggatgtcgacatggacttcaacaagggtgctgc 1113 Query: 289 tgatgctgctaagtttacttctggtgaacacggtaacgctgaacaagaagaaattgccaa 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 tgatgctgctaagtttacttctggtgaacacggtaacgctgaacaagaagaaattgccaa 1053 Query: 349 attggaaaaggctccaactgccgttgaaactatggaaatcaagccaccagctgcctcctt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 attggaaaaggctccaactgccgttgaaactatggaaatcaagccaccagctgcctcctt 993 Query: 409 caaggatttcaccagacatttcaaccaatggaagcacatgaagattttgatcggtaccgc 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 caaggatttcaccagacatttcaaccaatggaagcacatgaagattttgatcggtaccgc 933 Query: 469 tggttcatggttcttgttggatgttgccttctacagtgtttctttgaactccgctgttat 528 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 932 tggttcatggttcttgttggatgttgccttctacggtgtttctttgaactccgctgttat 873 Query: 529 tttgcaaactattggctacgctagttcttcctacgtttacagaaagttgtacaactctgc 588 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 872 tttgcaaactattggctacgctagttcttctaacgtttacagaaagttgtacaactctgc 813 Query: 589 cgttggtaacttgattttaatttgtgccggttctttgccaggttacctggtctctgtcgc 648 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 812 cgttggtaacttgattttaatttgtgccggttctttgccaggttactgggtctctgtcgc 753 Query: 649 ttacattgatgtccttgggtgaaaaacaatccattggat-ggttttgtcatcttgaccat 707 | |||||||||| |||| ||||| ||||||| | ||| ||||| |||||||||||||| Sbjct: 752 taccattgatgtcattggtagaaaaccaatccaattgatgggtttcgtcatcttgaccat 693 Query: 708 ttggttccggattaatgggtttgccttaccacaagaatggggaccatggtctatta 763 || |||| | | | || ||||| ||||| |||||| ||| ||||||||||||||| Sbjct: 692 tttgttctgta-tcattggtttcgcttacgacaagattggtgaccatggtctatta 638 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7344 Number of Sequences: 1807 Number of extensions: 7344 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)