BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZC05FM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1394 1604 0.0 >3x_Contig1394 Length = 5721 Score = 1604 bits (809), Expect = 0.0 Identities = 843/852 (98%), Gaps = 2/852 (0%) Strand = Plus / Minus Query: 88 atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4912 atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 4853 Query: 148 agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4852 agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 4793 Query: 208 catcagggattgtttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 267 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4792 catcagggattggttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 4733 Query: 268 catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4732 catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 4673 Query: 328 tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4672 tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 4613 Query: 388 agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4612 agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 4553 Query: 448 ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4552 ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 4493 Query: 508 atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4492 atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 4433 Query: 568 tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4432 tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 4373 Query: 628 catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattaggtcctttgg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4372 catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattaggtcctttgg 4313 Query: 688 gcgtacgtgtcattaacatgattacaggaggtgtagccacagacatcgctgataagaaga 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4312 gcgtacgtgtcattaacatgattacaggaggtgtagccacagacatcgctgataagaaga 4253 Query: 748 cattaccagaaagtagtatcttcaactttcccggagg-tatcaaagccgttgaaacccgt 806 ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 4252 cattaccagaaggtagtatcttcaactt-cccggagggtatcaaagccgttgaaacccgt 4194 Query: 807 nagaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagagaaacggtg 866 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4193 aagaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagagaaacggtg 4134 Query: 867 aatgatatcgaaaacggcagcattgaccccgtggatatatacccgggaacgatgcccacg 926 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| Sbjct: 4133 aatgatatcgaaaacggcagcattgacccggtggatatataccggggaacgatggccacg 4074 Query: 927 ttagtgaaatgg 938 ||||||||||| Sbjct: 4073 gtagtgaaatgg 4062 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5051 Number of Sequences: 1807 Number of extensions: 5051 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)