BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZC05FM1.SCF screened BAC_end
         (938 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1394                                                        1604   0.0  

>3x_Contig1394 
          Length = 5721

 Score = 1604 bits (809), Expect = 0.0
 Identities = 843/852 (98%), Gaps = 2/852 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4912 atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 4853

                                                                        
Query: 148  agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4852 agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 4793

                                                                        
Query: 208  catcagggattgtttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 267
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4792 catcagggattggttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 4733

                                                                        
Query: 268  catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4732 catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 4673

                                                                        
Query: 328  tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4672 tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 4613

                                                                        
Query: 388  agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4612 agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 4553

                                                                        
Query: 448  ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552 ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 4493

                                                                        
Query: 508  atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 4433

                                                                        
Query: 568  tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 4373

                                                                        
Query: 628  catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattaggtcctttgg 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4372 catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattaggtcctttgg 4313

                                                                        
Query: 688  gcgtacgtgtcattaacatgattacaggaggtgtagccacagacatcgctgataagaaga 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4312 gcgtacgtgtcattaacatgattacaggaggtgtagccacagacatcgctgataagaaga 4253

                                                                        
Query: 748  cattaccagaaagtagtatcttcaactttcccggagg-tatcaaagccgttgaaacccgt 806
            ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 4252 cattaccagaaggtagtatcttcaactt-cccggagggtatcaaagccgttgaaacccgt 4194

                                                                        
Query: 807  nagaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagagaaacggtg 866
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4193 aagaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagagaaacggtg 4134

                                                                        
Query: 867  aatgatatcgaaaacggcagcattgaccccgtggatatatacccgggaacgatgcccacg 926
            ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 4133 aatgatatcgaaaacggcagcattgacccggtggatatataccggggaacgatggccacg 4074

                        
Query: 927  ttagtgaaatgg 938
             |||||||||||
Sbjct: 4073 gtagtgaaatgg 4062


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5051
Number of Sequences: 1807
Number of extensions: 5051
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)