BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZC09FM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig709 1518 0.0 >3x_Contig709 Length = 3009 Score = 1518 bits (766), Expect = 0.0 Identities = 820/834 (98%), Gaps = 3/834 (0%) Strand = Plus / Plus Query: 89 tggaacacaacggatgccacatctgaggtgaatgacggtatcagggagtaattgtcggta 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tggaacacaacggatgccacatctgaggtgaatgacggtatcagggagtaattgtcggta 73 Query: 149 tcaactttcccgtacgtgtttggatagaattggtattctcgagatgcttgtaacaatgag 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 tcaactttcccgtacgtgtttggatagaattggtattctcgagatgcttgtaacaatgag 133 Query: 209 cagacgttaatgttttctatcgttgttatcgtcttggccagtatctgcattaagacattt 268 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 cagacgttaaggaaa-ctatcgttgttatcgtcttggccagtatctgcattaagacattt 192 Query: 269 catcacttccttgataagcaatattccctctttcgaatacccaagaaatgtgttataatt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 catcacttccttgataagcaatattccctctttcgaatacccaagaaatgtgttataatt 252 Query: 329 attccctgatatgaatcccatctgcttcatgagattgtcgctcatggatgaatcactgga 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 attccctgatatgaatcccatctgcttcatgagattgtcgctcatggatgaatcactgga 312 Query: 389 tccaatatctaacatctcctccatttctgcttcattgaaaaaatggttacctttcgctac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 tccaatatctaacatctcctccatttctgcttcattgaaaaaatggttacctttcgctac 372 Query: 449 acaagcaactatagcaatggcacaaaaccagttacgtgctagtgttacagtcctcctatg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 acaagcaactatagcaatggcacaaaaccagttacgtgctagtgttacagtcctcctatg 432 Query: 509 caaaagtgtgctcccagtgcttccagtcaccatttctctgttgtcgttgtatttcataag 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 caaaagtgtgctcccagtgcttccagtcaccatttctctgttgtcgttgtatttcataag 492 Query: 569 tagatccttagctcctcgtagatggaatttccattcttgagttccaaacgttgaactatc 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 tagatccttagctcctcgtagatggaatttccattcttgagttccaaacgttgaactatc 552 Query: 629 caatgtcaacaatagcacacataaattcaaagagtctatctgtgaaaaccccaatgattc 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 caatgtcaacaatagcacacataaattcaaagagtctatctgtgaaaaccccaatgattc 612 Query: 689 ttgggatagagattcgaattcttggtacaattgctgtagtgcttttctcaagaaatgttt 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 ttgggatagagattcgaattcttggtacaattgctgtagtgcttttctcaagaaatgttt 672 Query: 749 ccttattatattatcatgctctttcccgtaaacattgtagacatatttagcactgattga 808 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 cctaattatattatcatgctctttcccgtaaacattgtagacatatttagcactgattga 732 Query: 809 caccatcgaactctgtaagttagacttttcttgggcgtgtttttttatttgctctttata 868 |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| || Sbjct: 733 caccatcgaactctgtaagtaagacttttctcgggcgtg-ttttttatttgctcttatta 791 Query: 869 cgtgctggaattagatttggttac-aatgttagaatccggtgattgtgctagcg 921 ||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 792 cgtgctggaataagatatggttacaaatgttagaatccggtgattgtgctagcg 845 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6835 Number of Sequences: 1807 Number of extensions: 6835 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)