BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZC09FM1.SCF screened BAC_end
         (960 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig709                                                         1518   0.0  

>3x_Contig709 
          Length = 3009

 Score = 1518 bits (766), Expect = 0.0
 Identities = 820/834 (98%), Gaps = 3/834 (0%)
 Strand = Plus / Plus

                                                                       
Query: 89  tggaacacaacggatgccacatctgaggtgaatgacggtatcagggagtaattgtcggta 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  tggaacacaacggatgccacatctgaggtgaatgacggtatcagggagtaattgtcggta 73

                                                                       
Query: 149 tcaactttcccgtacgtgtttggatagaattggtattctcgagatgcttgtaacaatgag 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  tcaactttcccgtacgtgtttggatagaattggtattctcgagatgcttgtaacaatgag 133

                                                                       
Query: 209 cagacgttaatgttttctatcgttgttatcgtcttggccagtatctgcattaagacattt 268
           |||||||||| |    ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cagacgttaaggaaa-ctatcgttgttatcgtcttggccagtatctgcattaagacattt 192

                                                                       
Query: 269 catcacttccttgataagcaatattccctctttcgaatacccaagaaatgtgttataatt 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 catcacttccttgataagcaatattccctctttcgaatacccaagaaatgtgttataatt 252

                                                                       
Query: 329 attccctgatatgaatcccatctgcttcatgagattgtcgctcatggatgaatcactgga 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 attccctgatatgaatcccatctgcttcatgagattgtcgctcatggatgaatcactgga 312

                                                                       
Query: 389 tccaatatctaacatctcctccatttctgcttcattgaaaaaatggttacctttcgctac 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tccaatatctaacatctcctccatttctgcttcattgaaaaaatggttacctttcgctac 372

                                                                       
Query: 449 acaagcaactatagcaatggcacaaaaccagttacgtgctagtgttacagtcctcctatg 508
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acaagcaactatagcaatggcacaaaaccagttacgtgctagtgttacagtcctcctatg 432

                                                                       
Query: 509 caaaagtgtgctcccagtgcttccagtcaccatttctctgttgtcgttgtatttcataag 568
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caaaagtgtgctcccagtgcttccagtcaccatttctctgttgtcgttgtatttcataag 492

                                                                       
Query: 569 tagatccttagctcctcgtagatggaatttccattcttgagttccaaacgttgaactatc 628
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tagatccttagctcctcgtagatggaatttccattcttgagttccaaacgttgaactatc 552

                                                                       
Query: 629 caatgtcaacaatagcacacataaattcaaagagtctatctgtgaaaaccccaatgattc 688
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 caatgtcaacaatagcacacataaattcaaagagtctatctgtgaaaaccccaatgattc 612

                                                                       
Query: 689 ttgggatagagattcgaattcttggtacaattgctgtagtgcttttctcaagaaatgttt 748
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttgggatagagattcgaattcttggtacaattgctgtagtgcttttctcaagaaatgttt 672

                                                                       
Query: 749 ccttattatattatcatgctctttcccgtaaacattgtagacatatttagcactgattga 808
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cctaattatattatcatgctctttcccgtaaacattgtagacatatttagcactgattga 732

                                                                       
Query: 809 caccatcgaactctgtaagttagacttttcttgggcgtgtttttttatttgctctttata 868
           |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||  ||
Sbjct: 733 caccatcgaactctgtaagtaagacttttctcgggcgtg-ttttttatttgctcttatta 791

                                                                 
Query: 869 cgtgctggaattagatttggttac-aatgttagaatccggtgattgtgctagcg 921
           ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 792 cgtgctggaataagatatggttacaaatgttagaatccggtgattgtgctagcg 845


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6835
Number of Sequences: 1807
Number of extensions: 6835
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)