BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZC11RM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1535 811 0.0 >3x_Contig1535 Length = 11102 Score = 811 bits (409), Expect = 0.0 Identities = 487/505 (96%), Gaps = 6/505 (1%) Strand = Plus / Plus Query: 214 tggacaggtgtttaaaccatgttatgcggggaacatgcacgattggcttctttttcgact 273 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 tggacaggtgtttaaactttgttatgcggggaacatgcacgattggcttctttttcgact 78 Query: 274 tgctctacagaggcttcgtcatcagcaaaaaaatagcatggggactcgtctctgtgaatc 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 tgctctacagaggcttcgtcatcagcaaaaaaatagcatggggactcgtctctgtgaatc 138 Query: 334 ttttctagtgggatgacatgacgagggtagaaaaaatgtttaacggtagacaacaaactc 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 ttttctagtgggatgacatgacgagggtagaaaaaatgtttaacggtagacaacaaactc 198 Query: 394 ttatgtttgtctatggggtttgggaacatcacacctgactcttgttcatgtttttgtagt 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 ttatgtttgtctatggggtttgggaacatcacacctgactcttgttcatgtttttgtagt 258 Query: 454 ctatgcagtttcatttctttctcgtacagatcacaggcttgttggatgtattggtcctgc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 ctatgcagtttcatttctttctcgtacagatcacaggcttgttggatgtattggtcctgc 318 Query: 514 tgttcgggagtcaatttatccctgggtatcggc-attgagatccaaagagattttggcgt 572 ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| Sbjct: 319 tgttcgggagtcaatttat-cctggtaatcggcaattgagatccaaagagattttggcgt 377 Query: 573 aagtggtggtgtatatggggtgaagaagtagtatttttcgaaaatgaaagatacgacagc 632 | ||||||||||||||||| |||||||||||||| || |||||||||| ||||||||||| Sbjct: 378 aggtggtggtgtatatgggttgaagaagtagtatattccgaaaatgaaggatacgacagc 437 Query: 633 gattaggacgagagttacgacaaaaccagaggaaaatgaattccgccgacgtttttctgg 692 ||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||||| Sbjct: 438 gattaggacgagagtaacgacaaaa-cagaggaaaatgaa-tccgccgacg-ttttctgg 494 Query: 693 gtcattgaaacatttttgcaatggc 717 ||||| ||| || |||||||||||| Sbjct: 495 gtcatggaacca-ttttgcaatggc 518 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7389 Number of Sequences: 1807 Number of extensions: 7389 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)