BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZD02FM1.SCF screened BAC_end
         (871 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1451                                                        1481   0.0  

>3x_Contig1451 
          Length = 8346

 Score = 1481 bits (747), Expect = 0.0
 Identities = 771/777 (99%), Gaps = 2/777 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   tcctcaacttctcatttccttgaattccaagtgaaacttccaatagcctgtaatatctga 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 tcctcaacttctcatttccttgaattccaagtgaaacttccaatagcctgtaatatctga 3122

                                                                        
Query: 146  aattgtctggacttctcttaatcaaagttctgtacacaatagaggcttccttagaccgac 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 aattgtctggacttctcttaatcaaagttctgtacacaatagaggcttccttagaccgac 3062

                                                                        
Query: 206  caagtttcatttaaatagaagctttcctctctaaccagccatatctatcataaacatcgt 265
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 caagtttcattaaaatagaagctttcctctctaaccagccatatctatcataaacatcgt 3002

                                                                        
Query: 266  cggaaatcttttccaaatgctctaaaactctttccaaggattctttatcgttgcctgcct 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 cggaaatcttttccaaatgctctaaaactctttccaaggattctttatcgttgcctgcct 2942

                                                                        
Query: 326  tcttgtacaaaagatcattcttgtacatgatacattcgttgttctcatacatttctggtt 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 tcttgtacaaaagatcattcttgtacatgatacattcgttgttctcatacatttctggtt 2882

                                                                        
Query: 386  caccc-aacttgccttcagcaagctcttcaaatgtcgaaagagtattgattgcgtcttgc 444
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 caccccaacttgccttcagcaagctcttcaaatgtcgaaagagtattgattgcgtcttgc 2822

                                                                        
Query: 445  gtacgcccattcaaatcttgtgctatggccaatgaggtccaattggcacgatatcctctg 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 gtacgcccattcaaatcttgtgctatggccaatgaggtccaattggcacgatatcctctg 2762

                                                                        
Query: 505  tagttttcccagtacttttttctcgattccagcgcgcctttgaaatcatgaatttgagat 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 tagttttcccagtacttttttctcgattccagcgcgcctttgaaatcatgaatttgagat 2702

                                                                        
Query: 565  tgcaatgtcgccaaatctctatagatttgagtgtttgtagaaccattttctaatgcggcc 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 tgcaatgtcgccaaatctctatagatttgagtgtttgtagaaccattttctaatgcggcc 2642

                                                                        
Query: 625  ttgaaccactttacagcgtctgagtaatttttcacctgtctgtaataaattcctaataag 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 ttgaaccactttacagcgtctgagtaatttttcacctgtctgtaataaattcctaataag 2582

                                                                        
Query: 685  tgtccaccaattggacttacaagagtgcctttaattttggataacgctntatcaatgtaa 744
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2581 tgtccaccaattggacttacaagagtgcctttaattttggataacgctttatcaatgtaa 2522

                                                                        
Query: 745  ctagcagcttcttcaggtgtactacagaattgcaangtcaatcccttcaaaa-tatagag 803
            |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||
Sbjct: 2521 ctagcagcttcttcaggtgtactacagaattgcaagttcaatcccttcaaaattatagag 2462

                                                                     
Query: 804  tccacatgactgctgttcttcttcaagattgtgtccaagatcttcaacgacttcttg 860
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 tccacatgactgctgttcttcttcaagattgtgtccaagatcttcaacgacttcttg 2405


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6464
Number of Sequences: 1807
Number of extensions: 6464
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)