BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZD09FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig531 1566 0.0 >3x_Contig531 Length = 2671 Score = 1566 bits (790), Expect = 0.0 Identities = 826/833 (99%), Gaps = 4/833 (0%) Strand = Plus / Plus Query: 86 cccagtgccgtcagaaaagcagaactgttacataatcaatgtaaactgactatgaatgat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1587 cccagtgccgtcagaaaagcagaactgttacataatcaatgtaaactgactatgaatgat 1646 Query: 146 ttcaacagcactatgaagtactgcggtgaggatccaacaaattccgaagccaaaaacacg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1647 ttcaacagcactatgaagtactgcggtgaggatccaacaaattccgaagccaaaaacacg 1706 Query: 206 ttcttcagaaacttttttgaattcctaacgcttttcaataaaatatcacaagagaacaag 265 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1707 ttcttcagaaacttctctgaattcctaacgcttttcaataaaatatcacaagagaacaag 1766 Query: 266 gaacgagaagcaatgaatcgcgtacatgaacaaagacaacagttattacagaaggcttcg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 gaacgagaagcaatgaatcgcgtacatgaacaaagacaacagttattacagaaggcttcg 1826 Query: 326 acagaaacccaagttgaaaaatctgccgatgacgaagctgcagatacgatagatatactg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1827 acagaaacccaagttgaaaaatctgccgatgacgaagctgcagatacgatagatatactg 1886 Query: 386 atcaaaaaactgcgtagcgttgaccctcaacagacaatccctggttcatccgttcccgga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1887 atcaaaaaactgcgtagcgttgaccctcaacagacaatccctggttcatccgttcccgga 1946 Query: 446 acatcatctcatccagaaaaacgttctacgccaagaaccaacagagatcaaaatctatta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1947 acatcatctcatccagaaaaacgttctacgccaagaaccaacagagatcaaaatctatta 2006 Query: 506 tcacgagccatgacacttaagagcggcattcaaaacctgtgaacaacctctctcctctag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2007 tcacgagccatgacacttaagagcggcattcaaaacctgtgaacaacctctctcctctag 2066 Query: 566 ccctcagtcacatacaaacttttcccgatccaggaaacccaagtacaatacatatgaaca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2067 ccctcagtcacatacaaacttttcccgatccaggaaacccaagtacaatacatatgaaca 2126 Query: 626 gtttaaacgtatatatatatatatatatatatagaccaacgccggaacaatattactcga 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2127 gtttaaacgtatatatatatatatatatatatagaccaacgccggaacaatattactcga 2186 Query: 686 aaagtttcacataacttttccccacgaaacggaaaaataaagccctttaacgtcggaagc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2187 aaagtttcacataacttttccccacgaaacggaaaaataaagccctttaacgtcggaagc 2246 Query: 746 ccaaaatttcgtgaattgtccaacctttcagcatagccaaactgacagtactncgatatt 805 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2247 ccaaaatttcgtgaattgtccaacctttcagcatagccaaactgacagtactccgatatt 2306 Query: 806 catgcaaatctcatctacaaaccggtctctgcttctctcttcgtaa-catacacagtcta 864 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2307 catgcaaatctcatctacaaaccggtctctgcttctctcttcgtaaccatacacagtcta 2366 Query: 865 gatctaaaaa-ctagatctaaaaa-ctagatata-tacatcagcatttgatac 914 |||||||||| ||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 2367 gatctaaaaacctagatctaaaaacctagatatattacatcagcatttgatac 2419 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,335 Number of Sequences: 1807 Number of extensions: 13335 Number of successful extensions: 2861 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)