BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZE06FM1.SCF screened BAC_end (966 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1061 1586 0.0 >3x_Contig1061 Length = 4663 Score = 1586 bits (800), Expect = 0.0 Identities = 866/884 (97%), Gaps = 5/884 (0%) Strand = Plus / Minus Query: 85 aacgaaatattacacggaaacaaattgcaaaccaaaaaacagtcatctattctcagtaaa 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3236 aacgaaatattacacggaaacaaattgcaaaccaaaaaacagtcatctattctcagtaaa 3177 Query: 145 ttagcgcatgccacaatctcagacgcagcaagggccaatg-aatttctacttaaattcaa 203 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3176 ttagcgcatgccacaatctcagacgcagcaagggccaatgcaatttctacttaaattcaa 3117 Query: 204 tgccgttaagctaaatatgttagaaccggtctctgacactgtacagaagaagtctttcca 263 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3116 tgccgttaagctaaagatgttagaaccggtctctgacactgtacagaagaagtctttcca 3057 Query: 264 tacgaacgctgggagtatcagagggaacaaatacagggtttcagtgacggagtccaaaaa 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3056 tacgaacgctgggagtatcagagggaacaaatacagggtttcagtgacggagtccaaaaa 2997 Query: 324 cagggttgacccccttaaagaaagtctttcattcatttcagatccttctaagttcgatga 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2996 cagggttgacccccttaaagaaagtctttcattcatttcagatccttctaagttcgatga 2937 Query: 384 atcacagattaaacacccagccgatcttcctattcccatacagacaataagtactgaaga 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2936 atcacagattaaacacccagccgatcttcctattcccatacagacaataagtactgaaga 2877 Query: 444 taaccctccaactgacaccaccataacaaatataaccgaaactatatcaaaccaaggaca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2876 taaccctccaactgacaccaccataacaaatataaccgaaactatatcaaaccaaggaca 2817 Query: 504 aactagtgtcacttccgattctaatagcattaaaaattcgttgaagcgtggaatagacag 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2816 aactagtgtcacttccgattctaatagcattaaaaattcgttgaagcgtggaatagacag 2757 Query: 564 cgttcccggcccttcgtctactatccaccaagctcagatgaaaaagaaattatcgtttgc 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2756 cgttcccggcccttcgtctactatccaccaagctcagatgaaaaagaaattatcgtttgc 2697 Query: 624 tgattataagaaaaaaatcaaacctgcttaacggatgacttccttggtatcgaaaccttc 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2696 tgattataagaaaaaaatcaaacctgcttaacggatgacttccttggtatcgaaaccttc 2637 Query: 684 attagcacgcanacttttttttcagttcgggatgtacctataggtagtcagcggtggtaa 743 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2636 attagcacgcaaacttttttttcagttcgggatgtacctataggtagtcagcggtggtaa 2577 Query: 744 taaacggngagagtgtacttaacaatttagcctccttctcat-aaatgaactttnttttg 802 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 2576 taaacggggagagtgtacttaacaatttagcctccttctcataaaatgaacttttttttg 2517 Query: 803 cgagttatttaagaatttggacggtgggtttcgatttgctttatcgatatatgtnggaaa 862 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 2516 cgagttatttaggaatttggacggtggg-ttcgatttgctttatcgatatatgttggaaa 2458 Query: 863 actagnctatacttttctattatttatttacaatgnttataatt-accaagaactgacta 921 ||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 2457 actagtctatacttttctattatttatttacattgtttataattaaccaagaactgacta 2398 Query: 922 ctnctttagtattctctca-aaaagcgtatttgncttagataaa 964 || ||| ||||||||||| ||||||||||||| |||||||||| Sbjct: 2397 cttcttaggtattctctcagaaaagcgtatttgccttagataaa 2354 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6225 Number of Sequences: 1807 Number of extensions: 6225 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 966 length of database: 10,358,551 effective HSP length: 16 effective length of query: 950 effective length of database: 10,329,639 effective search space: 9813157050 effective search space used: 9813157050 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)