BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZE06RM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1699                                                        1433   0.0  

>3x_Contig1699 
          Length = 18038

 Score = 1433 bits (723), Expect = 0.0
 Identities = 839/871 (96%), Gaps = 5/871 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   acgttttggaaaacaaagacattgtactagaagcacctttcacagaagttatacaaccac 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4632 acgttttggaaaacaaagacattgtactagaagcacctttcacagaagttatacaaccac 4691

                                                                        
Query: 108  aaaagaccgaagaagaacttagaatccaagctgaaaaaagaagggagactggtaagaggt 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4692 aaaagaccgaagaagaacttagaatccaagctgaaaaaagaagggagactggtaagaggt 4751

                                                                        
Query: 168  tacaagaacaagccaaacaaagaaggttagaaaaacttcgtcaaaaagaggaagagtatg 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4752 tacaagaacaagccaaacaaagaaggttagaaaaacttcgtcaaaaagaggaagagtatg 4811

                                                                        
Query: 228  agtattatgttaatatcagagaagaattgcgcgaccaaccgaagagacaaattttaataa 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4812 agtattatgttaatatcagagaagaattgcgcgaccaaccgaagagacaaattttaataa 4871

                                                                        
Query: 288  ctctacagaacgcaggatttgacgatgaacaagactttatcaactacatctcaaaccttg 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4872 ctctacagaacgcaggatttgacgatgaacaagactttatcaactacatctcaaaccttg 4931

                                                                        
Query: 348  aaaaggttttgaaaagaggccgtatattagacgtggaagacgacgatcaagaagaatctc 407
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4932 aaaaggttttgaaaagaggccgtatatcagacgtggaagacgacgatcaagaagaatctc 4991

                                                                        
Query: 408  aggagtccaaatttgatttagtggatgtcccagatgaagagctaaacgatgaacaaaaaa 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4992 aggagtccaaatttgatttagtggatgtcccagatgaagagctaaacgatgaacaaaaaa 5051

                                                                        
Query: 468  aggagaaacgtaagcaaaggctattaaaggctaacattgaagcaagattaaaggcaaaag 527
            ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5052 aggagaaacgtaagccaaggctattaacggctaacattgaagcaagattaaaggcaaaag 5111

                                                                        
Query: 528  aggaaaaagcacaattgcaaaaggcattggaagaagcgaagaataaggatgaagattggc 587
            ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5112 aggaaaaagcacaattgcaaaaggcattggaagaagcgaagaaaaaggatgacgattggc 5171

                                                                        
Query: 588  ggaaacaagatttgaaagggtggacaagggac-aaaagattcaaactcgcgaaattgatc 646
            ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5172 ggaaacaagatttgacagggtggacaagggacaaaaagattcaaactcgcgaaattgatc 5231

                                                                        
Query: 647  aaaagtagaaaggacaagttgaagttgaatgatgaaatgaaggaccgtaaatcac-aagc 705
            || |||||||||||||||||||||||||| || |||||||||||||||||||||| ||||
Sbjct: 5232 aacagtagaaaggacaagttgaagttgaaggaggaaatgaaggaccgtaaatcacaaagc 5291

                                                                        
Query: 706  tactcaaagaagaatgaagaatcttgcatctttggcagaagacagtgttggtccccgtaa 765
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 5292 tactcaaagaagaatgaagaatcttgcatctttggcagaggacagtgttggtcccggtaa 5351

                                                                        
Query: 766  tagatctaaaca-gccactatagattacgatccctctgacacttttcgtgcgaatgacca 824
             ||||||| ||| |||||||||||| |||||||||||||||||||  ||||||||||| |
Sbjct: 5352 aagatctagacaggccactatagataacgatccctctgacactttcggtgcgaatgacga 5411

                                                                        
Query: 825  tgactggactatctattatgatattagcattc-caccagaagctttaaacgaatccattc 883
            |||||||||||||||| |||||| ||||| || ||||||| |||||| ||||||||||  
Sbjct: 5412 tgactggactatctataatgata-tagcaatcacaccagaggctttagacgaatccatcg 5470

                                           
Query: 884  gagatgattaccgggagattggggaattaga 914
             |||||| ||||||||||||| |||| ||||
Sbjct: 5471 aagatgaataccgggagattgtggaactaga 5501


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8121
Number of Sequences: 1807
Number of extensions: 8121
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)