BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZE06RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1699 1433 0.0 >3x_Contig1699 Length = 18038 Score = 1433 bits (723), Expect = 0.0 Identities = 839/871 (96%), Gaps = 5/871 (0%) Strand = Plus / Plus Query: 48 acgttttggaaaacaaagacattgtactagaagcacctttcacagaagttatacaaccac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4632 acgttttggaaaacaaagacattgtactagaagcacctttcacagaagttatacaaccac 4691 Query: 108 aaaagaccgaagaagaacttagaatccaagctgaaaaaagaagggagactggtaagaggt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4692 aaaagaccgaagaagaacttagaatccaagctgaaaaaagaagggagactggtaagaggt 4751 Query: 168 tacaagaacaagccaaacaaagaaggttagaaaaacttcgtcaaaaagaggaagagtatg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4752 tacaagaacaagccaaacaaagaaggttagaaaaacttcgtcaaaaagaggaagagtatg 4811 Query: 228 agtattatgttaatatcagagaagaattgcgcgaccaaccgaagagacaaattttaataa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4812 agtattatgttaatatcagagaagaattgcgcgaccaaccgaagagacaaattttaataa 4871 Query: 288 ctctacagaacgcaggatttgacgatgaacaagactttatcaactacatctcaaaccttg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4872 ctctacagaacgcaggatttgacgatgaacaagactttatcaactacatctcaaaccttg 4931 Query: 348 aaaaggttttgaaaagaggccgtatattagacgtggaagacgacgatcaagaagaatctc 407 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4932 aaaaggttttgaaaagaggccgtatatcagacgtggaagacgacgatcaagaagaatctc 4991 Query: 408 aggagtccaaatttgatttagtggatgtcccagatgaagagctaaacgatgaacaaaaaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4992 aggagtccaaatttgatttagtggatgtcccagatgaagagctaaacgatgaacaaaaaa 5051 Query: 468 aggagaaacgtaagcaaaggctattaaaggctaacattgaagcaagattaaaggcaaaag 527 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5052 aggagaaacgtaagccaaggctattaacggctaacattgaagcaagattaaaggcaaaag 5111 Query: 528 aggaaaaagcacaattgcaaaaggcattggaagaagcgaagaataaggatgaagattggc 587 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 5112 aggaaaaagcacaattgcaaaaggcattggaagaagcgaagaaaaaggatgacgattggc 5171 Query: 588 ggaaacaagatttgaaagggtggacaagggac-aaaagattcaaactcgcgaaattgatc 646 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5172 ggaaacaagatttgacagggtggacaagggacaaaaagattcaaactcgcgaaattgatc 5231 Query: 647 aaaagtagaaaggacaagttgaagttgaatgatgaaatgaaggaccgtaaatcac-aagc 705 || |||||||||||||||||||||||||| || |||||||||||||||||||||| |||| Sbjct: 5232 aacagtagaaaggacaagttgaagttgaaggaggaaatgaaggaccgtaaatcacaaagc 5291 Query: 706 tactcaaagaagaatgaagaatcttgcatctttggcagaagacagtgttggtccccgtaa 765 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 5292 tactcaaagaagaatgaagaatcttgcatctttggcagaggacagtgttggtcccggtaa 5351 Query: 766 tagatctaaaca-gccactatagattacgatccctctgacacttttcgtgcgaatgacca 824 ||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||| | Sbjct: 5352 aagatctagacaggccactatagataacgatccctctgacactttcggtgcgaatgacga 5411 Query: 825 tgactggactatctattatgatattagcattc-caccagaagctttaaacgaatccattc 883 |||||||||||||||| |||||| ||||| || ||||||| |||||| |||||||||| Sbjct: 5412 tgactggactatctataatgata-tagcaatcacaccagaggctttagacgaatccatcg 5470 Query: 884 gagatgattaccgggagattggggaattaga 914 |||||| ||||||||||||| |||| |||| Sbjct: 5471 aagatgaataccgggagattgtggaactaga 5501 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8121 Number of Sequences: 1807 Number of extensions: 8121 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)