BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZF09FM1.SCF screened BAC_end
         (940 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1377                                                        1493   0.0  

>3x_Contig1377 
          Length = 8397

 Score = 1493 bits (753), Expect = 0.0
 Identities = 782/791 (98%), Gaps = 1/791 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   acaaggtaatcaaatcattgaaacattcaaacttgtgcacaccatcagcagtataaatat 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491 acaaggtaatcaaatcattgaaacattcaaacttgtgcacaccatcagcagtataaatat 6432

                                                                        
Query: 147  tggtggtgtactccgaaacagacctgtacaaatgcgattgtagaggttgggcagcgcatt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6431 tggtggtgtactccgaaacagacctgtacaaatgcgattgtagaggttgggcagcgcatt 6372

                                                                        
Query: 207  cttctgatagagaaacgtgttgtataagcgttttcaagtccacagaatgcttattattga 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6371 cttctgatagagaaacgtgttgtataagcgttttcaagtccacagaatgcttattattga 6312

                                                                        
Query: 267  attccaggatgttactcatggtatcatcactgaatctggtacggtcaaattctttatcga 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6311 attccaggatgttactcatggtatcatcactgaatctggtacggtcaaattctttatcga 6252

                                                                        
Query: 327  gacagcatatcataaattggtccaactgtatgttcctggcatactccattgcacgttcaa 386
            |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6251 gacagcattttataaattggtccaactgtatgtacctggcatactccattgcacgttcaa 6192

                                                                        
Query: 387  caggaataccaacactgatgaaaaacttgatatcattcttactcaagaagtcatactgtg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6191 caggaataccaacactgatgaaaaacttgatatcattcttactcaagaagtcatactgtg 6132

                                                                        
Query: 447  ataaagtgttcaagggtccgaagaacacattgttactcaactgttggggtttcatctggt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6131 ataaagtgttcaagggtccgaagaacacattgttactcaactgttggggtttcatctggt 6072

                                                                        
Query: 507  tcaacgtatgagccaatgcataattattatggtgagacatgtctagttgcttttttccat 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6071 tcaacgtatgagccaatgcataattattatggtgagacatgtctagttgcttttttccat 6012

                                                                        
Query: 567  aaagaatatcggaccacagattgtaagtagggtgaaagattgagacagagagcaaaacac 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6011 aaagaatatcggaccacagattgtaagtagggtgaaagattgagacagagagcaaaacac 5952

                                                                        
Query: 627  aggctagttgttaccaatactcgaattatacaaatgaggttcaatgccagttagtaagct 686
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5951 aggctagttgttaccaatactcgatttatacaaatgaggttcaatgccagttagtaagct 5892

                                                                        
Query: 687  cactccgctcttgtcctgagtcaaagccttacgtgagtcgcattgatgaggttagtattc 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5891 cactccgctcttgtcctgagtcaaagccttacgtgagtcgcattgatgaggttagtattc 5832

                                                                        
Query: 747  ttttttgccaaaagatcannaatctgaaaaatagaaaaatgaatttttcaagctctaaag 806
            ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5831 ttttttgccaaaagatcaaaaatctgaaaaatagaaaaatgaatttttcaagctctaaag 5772

                                                                        
Query: 807  gcttattctagtaaagtaatggaaatggtgtaagctcggtcaaaggcttt-atgcctgta 865
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||
Sbjct: 5771 gcttattctagtaaagtaatggaaatggtgtaagctcggtcaaaggctttaatgctggta 5712

                       
Query: 866  caacggaggcg 876
            |||||||||||
Sbjct: 5711 caacggaggcg 5701


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6133
Number of Sequences: 1807
Number of extensions: 6133
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)