BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZF10RM1.SCF screened BAC_end
         (963 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1502                                                        1209   0.0  

>3x_Contig1502 
          Length = 14970

 Score = 1209 bits (610), Expect = 0.0
 Identities = 680/698 (97%), Gaps = 4/698 (0%)
 Strand = Plus / Plus

                                                                         
Query: 49    gtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacaggctttg 108
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11663 gtgaaaaaccaggacaagtcaatgctcgagaagttaatcaaaccagctaaacaggctttg 11722

                                                                         
Query: 109   ttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggaccaagt 168
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11723 ttaatgactggtaaacaaggggaagatttagctgctttcaaattgccaaagggaccaagt 11782

                                                                         
Query: 169   tgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtgaggct 228
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11783 tgtgttttaccaatatttttacatggtttaatgtatggttctggtgacgaacgtgaggct 11842

                                                                         
Query: 229   tcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaatcctat 288
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11843 tcagcccttgccattgcggatattgtctccaagactcctgcagcaggcttgaaatcctat 11902

                                                                         
Query: 289   gttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtgacatc 348
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11903 gttacagttatcactggtcctttgattcgtgttgttggagaaagattcaatagtgacatc 11962

                                                                         
Query: 349   aaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgttgaga 408
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11963 aaggcagctatcctttatgctttgaatatcctatttgcgaaaattcctcagttgttgaga 12022

                                                                         
Query: 409   cctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaactaatgag 468
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12023 cctttcattcctcagttgcaaagaacgtttgtcaaatctttgtccgatccaactaatgag 12082

                                                                         
Query: 469   gtattacgtcttcgtgctgccaaggcattatgaacccttaattg-ataccagcctagagt 527
             |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 12083 gtattacgtcttcgtgctgccaaggcattaggaa-ccttaattgaataccagcctagagt 12141

                                                                         
Query: 528   tgatccattggttgtcgaactggttacaggtgctaagcaaagtgatgatgatggtgttaa 587
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 12142 tgatccattggttgtcgaactggtaacaggtgctaagcaaagtgatgatgatggtgttaa 12201

                                                                         
Query: 588   gactgctatgttgaaagctttattggaagccgtatcaaaagcaggtttcaaattgaacca 647
             ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 12202 gactgctatgttgaaggctttattggaagccgtatcaaaggcaggttccaaattgaacca 12261

                                                                         
Query: 648   aacctcaaaaaccaatatcttaaatttgatcgaaagagaaatgnttttctgcaaatgata 707
             ||||||||||||||||||||||||||||||||||  ||||||| || |||||||||||||
Sbjct: 12262 aacctcaaaaaccaatatcttaaatttgatcgaagaagaaatg-ttatctgcaaatgata 12320

                                                   
Query: 708   actttccattggcctacgccaaattaattcggatcctt 745
             |  |  || |||||||||| ||||||| ||||||||||
Sbjct: 12321 agctcgcagtggcctacgcgaaattaa-tcggatcctt 12357


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7558
Number of Sequences: 1807
Number of extensions: 7558
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)