BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZG01RM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig774                                                         1300   0.0  

>3x_Contig774 
          Length = 2612

 Score = 1300 bits (656), Expect = 0.0
 Identities = 695/706 (98%), Gaps = 2/706 (0%)
 Strand = Plus / Minus

                                                                       
Query: 49  aaggtttaggaccgaatgtcatagtaatgttcttaatattgcaaactcatagtctgtttc 108
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aaggtttaggaccgaatgtcatagtaatgttcttaatattgcaaactcatagtctgtttc 651

                                                                       
Query: 109 tttattttcgccagtgtggcactccatgatcacgtgtcagtacacagcacgtgatcaaca 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tttattttcgccagtgtggcactccatgatcacgtgtcagtacacagcacgtgatcaaca 591

                                                                       
Query: 169 tactaaaatccgggtaatcaaagaacaaaataacaaaacatgttacccggccatctgttt 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tactaaaatccgggtaatcaaagaacaaaataacaaaacatgttacccggccatctgttt 531

                                                                       
Query: 229 cgggatttcttcttggttaccggaaaaactttcctataggaactggaccagtcattgcgc 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cgggatttcttcttggttaccggaaaaactttcctataggaactggaccagtcattgcgc 471

                                                                       
Query: 289 acgtgactcaaattccatcatcgcggggactgagcaaaatgcaaaagaaattgaaaagtt 348
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acgtgactcaaattccatcatcgcggggactgagcaaaatgcaaaagaaattgaaaagtt 411

                                                                       
Query: 349 tccactatcctatgctgtaaaccacaactgtggttttcccgatcccaaaacagcaagcac 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tccactatcctatgctgtaaaccacaactgtggttttcccgatcccaaaacagcaagcac 351

                                                                       
Query: 409 gatgccacagcaaagataacatcaaaacggtctccaataatactacgtaaagatatgaat 468
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gatgccacagcaaagataacatcaaaacggtctccaataatactacgtaaagatatgaat 291

                                                                       
Query: 469 tccattcccacacataacacagttgtggtttgaatcatcacaggtcggttctctatagag 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tccattcccacacataacacagttgtggtttgaatcatcacaggtcggttctctatagag 231

                                                                       
Query: 529 actacggaccactacatacttagtcaggtacaggctgacacaattcgtggttcttcggtt 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 actacggaccactacatacttagtcaggtacaggctgacacaattcgtggttcttcggtt 171

                                                                       
Query: 589 ntttccacacattgtattctgtgtcaag-tgctttgcgtncacctgacatatctctttca 647
            ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 170 ttttccacacattgtattctgtgtcaagttgctttgcgtccacctgacatatctctttca 111

                                                                       
Query: 648 cacacactctctggtatctttactttccattactcaaccacattacagttgcaatgactt 707
           ||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||
Sbjct: 110 cacacactctctggtatctttacttcccattactcaaccacataccagttgcaatgactt 51

                                                         
Query: 708 aagttacttagcttagttgtaggtatgtttcacaaagggtgggtag 753
           |||||||| ||||||||||||| |||| ||||||||| ||| ||||
Sbjct: 50  aagttactcagcttagttgtagttatg-ttcacaaagtgtgtgtag 6


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5891
Number of Sequences: 1807
Number of extensions: 5891
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)