BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZG01RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig774 1300 0.0 >3x_Contig774 Length = 2612 Score = 1300 bits (656), Expect = 0.0 Identities = 695/706 (98%), Gaps = 2/706 (0%) Strand = Plus / Minus Query: 49 aaggtttaggaccgaatgtcatagtaatgttcttaatattgcaaactcatagtctgtttc 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 aaggtttaggaccgaatgtcatagtaatgttcttaatattgcaaactcatagtctgtttc 651 Query: 109 tttattttcgccagtgtggcactccatgatcacgtgtcagtacacagcacgtgatcaaca 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 tttattttcgccagtgtggcactccatgatcacgtgtcagtacacagcacgtgatcaaca 591 Query: 169 tactaaaatccgggtaatcaaagaacaaaataacaaaacatgttacccggccatctgttt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 tactaaaatccgggtaatcaaagaacaaaataacaaaacatgttacccggccatctgttt 531 Query: 229 cgggatttcttcttggttaccggaaaaactttcctataggaactggaccagtcattgcgc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 cgggatttcttcttggttaccggaaaaactttcctataggaactggaccagtcattgcgc 471 Query: 289 acgtgactcaaattccatcatcgcggggactgagcaaaatgcaaaagaaattgaaaagtt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 acgtgactcaaattccatcatcgcggggactgagcaaaatgcaaaagaaattgaaaagtt 411 Query: 349 tccactatcctatgctgtaaaccacaactgtggttttcccgatcccaaaacagcaagcac 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 tccactatcctatgctgtaaaccacaactgtggttttcccgatcccaaaacagcaagcac 351 Query: 409 gatgccacagcaaagataacatcaaaacggtctccaataatactacgtaaagatatgaat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gatgccacagcaaagataacatcaaaacggtctccaataatactacgtaaagatatgaat 291 Query: 469 tccattcccacacataacacagttgtggtttgaatcatcacaggtcggttctctatagag 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 tccattcccacacataacacagttgtggtttgaatcatcacaggtcggttctctatagag 231 Query: 529 actacggaccactacatacttagtcaggtacaggctgacacaattcgtggttcttcggtt 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 actacggaccactacatacttagtcaggtacaggctgacacaattcgtggttcttcggtt 171 Query: 589 ntttccacacattgtattctgtgtcaag-tgctttgcgtncacctgacatatctctttca 647 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 170 ttttccacacattgtattctgtgtcaagttgctttgcgtccacctgacatatctctttca 111 Query: 648 cacacactctctggtatctttactttccattactcaaccacattacagttgcaatgactt 707 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 110 cacacactctctggtatctttacttcccattactcaaccacataccagttgcaatgactt 51 Query: 708 aagttacttagcttagttgtaggtatgtttcacaaagggtgggtag 753 |||||||| ||||||||||||| |||| ||||||||| ||| |||| Sbjct: 50 aagttactcagcttagttgtagttatg-ttcacaaagtgtgtgtag 6 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5891 Number of Sequences: 1807 Number of extensions: 5891 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)