BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC7ZG04FM1.SCF screened BAC_end
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1684 1520 0.0
>3x_Contig1684
Length = 14609
Score = 1520 bits (767), Expect = 0.0
Identities = 805/814 (98%), Gaps = 3/814 (0%)
Strand = Plus / Plus
Query: 83 tctcctaaattataacgcgccaactggaaggtttccttgaccatggtgtcactcgccaga 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13060 tctcctaaattataacgcgccaactggaaggtttccttgaccatggtgtcactcgccaga 13119
Query: 143 tcccacgctgtttttccaacattgttagtaattgtaggatctgcttttaaagtggacaac 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13120 tcccacgctgtttttccaacattgttagtaattgtaggatctgcttttaaagtggacaac 13179
Query: 203 aacaccaataccatgtgtttcaagccgtgagatgatgcataatgtagcattgttggtgtg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13180 aacaccaataccatgtgtttcaagccgtgagatgatgcataatgtagcattgttggtgtg 13239
Query: 263 tgatgatattcagaagagggttgcaaagtaatattgacatcaagattgtttttcttgata 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13240 tgatgatattcagaagagggttgcaaagtaatattgacatcaagattgtttttcttgata 13299
Query: 323 tacgatattaacagcggcgccttactcttttgaataaatgagattagcttttcggtatgt 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13300 tacgatattaacagcggcgccttactcttttgaataaatgagattagcttttcggtatgt 13359
Query: 383 tgttcatcttctgtcttcagaggcactggtgttggagaatttgtaagtttcctaggtttg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13360 tgttcatcttctgtcttcagaggcactggtgttggagaatttgtaagtttcctaggtttg 13419
Query: 443 ttctttgaatgatcagtttgcaattttttgacttttggttgaggtttgtccgttatcgat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13420 ttctttgaatgatcagtttgcaattttttgacttttggttgaggtttgtccgttatcgat 13479
Query: 503 aaatacgtcaattgaacccaggcacgccttagttcatttgaggatgggcgcatcgtagtg 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13480 aaatacgtcaattgaacccaggcacgccttagttcatttgaggatgggcgcatcgtagtg 13539
Query: 563 aatgggaaagactttagtttgacatcagttttagagatgcaagtattatctaagaagatc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13540 aatgggaaagactttagtttgacatcagttttagagatgcaagtattatctaagaagatc 13599
Query: 623 tttctatctgtgacactattggctctaatgaaaatattgtcacactttgcaatgtanggt 682
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 13600 tttctatctgtgacactattggctctaatgaaaatattgtcacactttgcaatgtagggt 13659
Query: 683 tcccaatccttt-acaatgcttgtatgtctgctttcaacgctgcttcattatatctacgt 741
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13660 tcccaatcctttaacaatgcttgtatgtctgctttcaacgctgcttcattatatctacgt 13719
Query: 742 agagttgaaccagcggaatttgcctttcccttggcattgtcatttgctgattgggagcca 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13720 agagttgaaccagcggaatttgcctttcccttggcattgtcatttgctgattgggagcca 13779
Query: 802 ccttgctttcttctggtagtgtatcgatggaacgttttctgtttccaaaactgtactgac 861
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 13780 ccttgctttcttctggtagtgtatcgatggaacgttttctgttccaaaaactgtactgac 13839
Query: 862 tgcttctgtnagagataggat-tatttaattttg 894
|||| ||| ||||||||||| |||||| |||||
Sbjct: 13840 tgctcttgt-agagataggatatatttatttttg 13872
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6519
Number of Sequences: 1807
Number of extensions: 6519
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)