BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZG07RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1792 1191 0.0 >3x_Contig1792 Length = 28468 Score = 1191 bits (601), Expect = 0.0 Identities = 650/662 (98%), Gaps = 4/662 (0%) Strand = Plus / Plus Query: 48 ttgagtgaaatattcaacatgctggtaagaaggtgcgccagcgattaaggccatctttct 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15735 ttgagtgaaatattcaacatgctggtaagaaggtgcgccagcgattaaggccatctttct 15794 Query: 108 aatgaagataggcaacagcatcattaacacggccaacgcgatggttggagccaaactggt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15795 aatgaagataggcaacagcatcattaacacggccaacgcgatggttggagccaaactggt 15854 Query: 168 tatgataccaagcaattgatctggcatgttgtagataaatttcaaccatggtaatttgtt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15855 tatgataccaagcaattgatctggcatgttgtagataaatttcaaccatggtaatttgtt 15914 Query: 228 agtcaagtaggtgatattggagaccataccgacaaatgcaacggggaaagcccacaagat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15915 agtcaagtaggtgatattggagaccataccgacaaatgcaacggggaaagcccacaagat 15974 Query: 288 gaccaaggcaacaatggcagcaatactaccgaattttctaaccaatctttccaaccagaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15975 gaccaaggcaacaatggcagcaatactaccgaattttctaaccaatctttccaaccagaa 16034 Query: 348 cattctcaagttgaaccattgaacgtctgtaggcgagataccgacgtacgctggagtcaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16035 cattctcaagttgaaccattgaacgtctgtaggcgagataccgacgtacgctggagtcaa 16094 Query: 408 tgacaatggtgaatggtgactaaccatttggaccgctttctgagcatcgtactgagtatt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16095 tgacaatggtgaatggtgactaaccatttggaccgctttctgagcatcgtactgagtatt 16154 Query: 468 gaattcgacaaagacggaattcattggtttttcttccatatgtttgttttgcaactcttg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16155 gaattcgacaaagacggaattcattggtttttcttccatatgtttgttttgcaactcttg 16214 Query: 528 aatctttgcatttagttcanngcacttctcctttgcatagttgatagtatccactttctt 587 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 16215 aatctttgcatttagttcaggcaacttctcctttgcatagttgatagtatccactttctt 16274 Query: 588 a-caataacaggtttcaccctatgagaangtcttttcttctctggcacgtattgagtaat 646 | ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 16275 accaataacaggtttcaacctatgagaaggtcttttcttctctggcacgtattgagtaat 16334 Query: 647 atcgttagcaatcttaccttggatcggcaccaccctttctttttctttttctttgctaat 706 |||||||||||||||| ||||||||||||||| |||||||| ||| ||||| |||||||| Sbjct: 16335 atcgttagcaatctta-cttggatcggcacca-cctttcttcttc-ttttccttgctaat 16391 Query: 707 gg 708 || Sbjct: 16392 gg 16393 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8481 Number of Sequences: 1807 Number of extensions: 8481 Number of successful extensions: 93 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)