BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZG10RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1061 1350 0.0 >3x_Contig1061 Length = 4663 Score = 1350 bits (681), Expect = 0.0 Identities = 730/743 (98%), Gaps = 3/743 (0%) Strand = Plus / Minus Query: 55 attacacggaaacaaattgcaaaccaaaaaacagtcatctattctcagtaaattagcgca 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3228 attacacggaaacaaattgcaaaccaaaaaacagtcatctattctcagtaaattagcgca 3169 Query: 115 tgccacaatctcagacgcagcaagggccaatg-aatttctacttaaattcaatgccgtta 173 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3168 tgccacaatctcagacgcagcaagggccaatgcaatttctacttaaattcaatgccgtta 3109 Query: 174 agctaaagatgttagaaccggtctctgacactgtacagaagaagtctttccatacgaacg 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3108 agctaaagatgttagaaccggtctctgacactgtacagaagaagtctttccatacgaacg 3049 Query: 234 ctgggagtatcagagggaacaaatacagggtttcagtgacggagtccaaaaacagggttg 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3048 ctgggagtatcagagggaacaaatacagggtttcagtgacggagtccaaaaacagggttg 2989 Query: 294 acccccttaaagaaagtctttcattcatttcagatccttctaagttcgatgaatcacaga 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2988 acccccttaaagaaagtctttcattcatttcagatccttctaagttcgatgaatcacaga 2929 Query: 354 ttaaacacccagccgatcttcctattcccatacagacaataagtactgaagataaccctc 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2928 ttaaacacccagccgatcttcctattcccatacagacaataagtactgaagataaccctc 2869 Query: 414 caactgacaccaccataacaaatataaccgaaactatatcaaaccaaggacaaactagtg 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2868 caactgacaccaccataacaaatataaccgaaactatatcaaaccaaggacaaactagtg 2809 Query: 474 tcacttccgattct-atagcattaaaaattcgttgaagcgtggaatagacagcgttcccg 532 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2808 tcacttccgattctaatagcattaaaaattcgttgaagcgtggaatagacagcgttcccg 2749 Query: 533 gcccttcgtctactatccaccaagctcagatgaaaaagaaattatcgnttgctgattata 592 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2748 gcccttcgtctactatccaccaagctcagatgaaaaagaaattatcgtttgctgattata 2689 Query: 593 ngaaaaaaatcaaacctgcttaaccgatgactttcttggtatcgaaaccttcattagcac 652 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 2688 agaaaaaaatcaaacctgcttaacggatgacttccttggtatcgaaaccttcattagcac 2629 Query: 653 gcaaactttttttt-agttcgggatgtacctataggtagtcagcggtgggtataaacggg 711 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2628 gcaaacttttttttcagttcgggatgtacctataggtagtcagcggtggtaataaacggg 2569 Query: 712 gagagtgtacttaacaatttagcctccttctcataaaatgaacttttttttgccagtttt 771 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 2568 gagagtgtacttaacaatttagcctccttctcataaaatgaacttttttttgcgagttat 2509 Query: 772 ttagaaatttggacggggggttc 794 |||| ||||||||||| |||||| Sbjct: 2508 ttaggaatttggacggtgggttc 2486 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6506 Number of Sequences: 1807 Number of extensions: 6506 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)