BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZG11RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig410 1372 0.0 >3x_Contig410 Length = 1641 Score = 1372 bits (692), Expect = 0.0 Identities = 738/748 (98%), Gaps = 4/748 (0%) Strand = Plus / Plus Query: 47 ttggaactattgtcgcatggtgagactttccctagacaagaagctactgctttattcttt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 ttggaactattgtcgcatggtgagactttccctagacaagaagctactgctttattcttt 954 Query: 107 tccatttcgaaattgttccaacaccctaacgattctttgagacaaatcgtttacgtggct 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 tccatttcgaaattgttccaacaccctaacgattctttgagacaaatcgtttacgtggct 1014 Query: 167 attaaggaattgtgtggaatctccgatgatatcttgatggctacttcttcaattatgaaa 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 attaaggaattgtgtggaatctccgatgatatcttgatggctacttcttcaattatgaaa 1074 Query: 227 gatgttcaaaatggttcagatctagtgaagcctaatgctattagagcattgatccgtgtc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 gatgttcaaaatggttcagatctagtgaagcctaatgctattagagcattgatccgtgtc 1134 Query: 287 ttggatgagtccactgcattttctgcagaaagattattgaaaaattcgttggttagcaaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 ttggatgagtccactgcattttctgcagaaagattattgaaaaattcgttggttagcaaa 1194 Query: 347 catccatctatttgttctgcttctttggtcagttcataccatttattaccaatcgctgaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1195 catccatctatttgttctgcttctttggtcagttcataccatttattaccaatcgctgaa 1254 Query: 407 actacggtgaagagatttgctaatgagactcaggaagccgttggtgatttgaaacagttg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1255 actacggtgaagagatttgctaatgagactcaggaagccgttggtgatttgaaacagttg 1314 Query: 467 ccatatccagatgagaacagtagatattatccaactacgtctcatatctctcaataccat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 ccatatccagatgagaacagtagatattatccaactacgtctcatatctctcaataccat 1374 Query: 527 gcattgggtttgttgtaccaattgaagaatcacgataagatggctttgatcaaattgatc 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1375 gcattgggtttgttgtaccaattgaagaatcacgataagatggctttgatcaaattgatc 1434 Query: 587 caacagtttgccggtcattcttcaccattgaaaaaataattggctcaagtacaaatggtt 646 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1435 caacagtttgccggtcattcttcaccattgaaaaatcaattggctcaagtacaaatggtt 1494 Query: 647 aaattcgtgcaccaattggttttgaaggatcctaactccatccccca-ttcttaccacta 705 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1495 aaattcgtgcaccaattggttttgaaggatcctaactccatcccccagttcttaccacta 1554 Query: 706 atagctaattggttgcaaagcagacacgaagctgttgcttttgaaagctt-gtaagctta 764 ||||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||| Sbjct: 1555 atagctaattggttgcaaagcagacacgaggctgttgc-tttggaagcttggtaagctta 1613 Query: 765 ctgcg-tctcttttcaacttggttccta 791 ||||| ||||| | |||||||||||||| Sbjct: 1614 ctgcgttctctatccaacttggttccta 1641 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8072 Number of Sequences: 1807 Number of extensions: 8072 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)