BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZH05RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1394 1596 0.0 >3x_Contig1394 Length = 5721 Score = 1596 bits (805), Expect = 0.0 Identities = 842/853 (98%), Gaps = 1/853 (0%) Strand = Plus / Minus Query: 48 taccgttcca-cactgacgaaaagtacttgtgtacttggggtattgacagtgcctacgtc 106 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 taccgttccaacactgacgaaaagtacttgtgtacttggggtattgacagtgcctacgtc 797 Query: 107 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 737 Query: 167 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 677 Query: 227 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 617 Query: 287 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 557 Query: 347 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 497 Query: 407 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 437 Query: 467 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtggtagcgatggttgt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtggtagcgatggttgt 377 Query: 527 accgtttcagtgacttctggtgctgctaatttcgttttatacgattaatgactcttttca 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 accgtttcagtgacttctggtgctgctaatttcgttttatacgattaatgactcttttca 317 Query: 587 gaggcattggcgggatgttatttaccgttgctgtttttcttttcttccctagtctgctat 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 gaggcattggcgggatgttatttaccgttgctgtttttcttttcttccctagtctgctat 257 Query: 647 ctgaatcctctgtatctgtcaaaaattgaaatggaactaacatcattaatggtgtcatgt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 ctgaatcctctgtatctgtcaaaaattgaaatggaactaacatcattaatggtgtcatgt 197 Query: 707 tgtgcgtgtgtgcatatttttgtgagtactatcttcatgaaagcacgaagcattttcaat 766 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 196 tgtgcgtgtgtgcatatttttgtgagtactatctccatgaaagcacgaagcattttcaat 137 Query: 767 cgacctattagaatgtaccctcattgcgtctcgtacgttttggcatggcaccatctttcg 826 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 136 cgacctataagaatgtaccctcattgcgtctcgtacgttttggcatggcaccatcttccg 77 Query: 827 atgtttcattacactcttcatttcattctggattgatataggagaattgaggtgctcaat 886 ||||||||||||||||| |||||||||||| || ||||| ||||||||| |||||||| Sbjct: 76 atgtttcattacactctccatttcattctgaatgagtatagaagaattgagttgctcaat 17 Query: 887 tccaacccggcga 899 ||||||||||||| Sbjct: 16 tccaacccggcga 4 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5682 Number of Sequences: 1807 Number of extensions: 5682 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)