BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZH08FM1.SCF screened BAC_end
         (922 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1730                                                        1515   0.0  

>3x_Contig1730 
          Length = 17223

 Score = 1515 bits (764), Expect = 0.0
 Identities = 824/838 (98%), Gaps = 5/838 (0%)
 Strand = Plus / Plus

                                                                         
Query: 90    cacagaatggttcattgcaaagtatgggcttttagtgaggaagatttggacggaccaaat 149
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13916 cacagaatggttcattgcaaagtatgggcttttagtgaggaagatttggacggaccaaat 13975

                                                                         
Query: 150   atctttcggtgctaaactcgcggaacttctatgtcaacggactaggtcaaaaaaaagatg 209
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13976 atctttcggtgctaaactcgcggaacttctatgtcaacggactaggtcaaaaaaaagatg 14035

                                                                         
Query: 210   tagaagaaacactgcactcgctatttttctagcacaatgtctaaacccatcacaatccat 269
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14036 tagaagaaacactgcactcgctatttttctagcacaatgtctaaacccatcacaatccat 14095

                                                                         
Query: 270   tgcatttgttttcggaccctgtacagtagcaccaggtaaggttatctcaatggaccgaaa 329
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14096 tgcatttgttttcggaccctgtacagtagcaccaggtaaggttatctcaatggaccgaaa 14155

                                                                         
Query: 330   aaatcatatcaggcagcatagaaatatagaggaagacaaggatgtgaaatattggaaacc 389
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14156 aaatcatatcaggcagcatagaaatatagaggaagacaaggatgtgaaatattggaaacc 14215

                                                                         
Query: 390   ttctagagaattttacaataaaatgagtaagtccttaaagtttgctccatgcacggtatt 449
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14216 ttctagagaattttacaataaaatgagtaagtccttaaagtttgctccatgcacggtatt 14275

                                                                         
Query: 450   cgtcgcatccatggatcaggtcggaatatgggagatgagatcctgtttgaacaactttat 509
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14276 cgtcgcatccatggatcaggtcggaatatgggagatgagatcctgtttgaacaactttat 14335

                                                                         
Query: 510   tcaatacgaatccttcaatgatagaaatttcatatatgattggcaggcgtatattcaagg 569
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14336 tcaatacgaatccttcaatgatagaaatttcatatatgattggcaggcgtatattcaagg 14395

                                                                         
Query: 570   gaaaggatgttatgaaataaccagaattgttatcaaaacttctaacaagctattactgaa 629
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14396 gaaaggatgttatgaaataaccagaattgttatcaaaacttctaacaagctattactgaa 14455

                                                                         
Query: 630   tgggatctttggtccagtctcatccttgaaagacaaggacacacatgtatctgacactcc 689
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14456 tgggatctttggtccagtctcatccttgaaagacaaggacacacatgtatctgacactcc 14515

                                                                         
Query: 690   aaagggctttggagggtctggaaccttccgttac-aagggccaagtagtaatctaccatc 748
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 14516 aaagggctttggagggtctggaaccttccgttacaaagggccaagtagtaatctaccatc 14575

                                                                         
Query: 749   aattttgataagtttatctgttgatacatctcgcagcgctgctgaagccttgcaagaatg 808
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 14576 aattttgataagtttatctgttgatacatctcgcagcgctgctgaagccttgcaagaaat 14635

                                                                         
Query: 809   cccagataaa-tttcctttc-aatggaatgctactantaacacttgaatcagnaatacgt 866
              ||||||||| ||||||||| |||||||||||||||  |||||||||||||  |||||||
Sbjct: 14636 gccagataaattttcctttcaaatggaatgctactataaacacttgaatcaagaatacgt 14695

                                                                       
Query: 867   ttctgtagaaacg-aatttattcccagtacaaccttacaagttg-acatcttttaacc 922
             ||||||||||||| |||||||||||||||||||||||| || || |||||||||||||
Sbjct: 14696 ttctgtagaaacgaaatttattcccagtacaaccttaccaggtgaacatcttttaacc 14753


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6323
Number of Sequences: 1807
Number of extensions: 6323
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)