BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZH08RM1.SCF screened BAC_end
         (915 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1705                                                        1413   0.0  

>3x_Contig1705 
          Length = 16734

 Score = 1413 bits (713), Expect = 0.0
 Identities = 820/850 (96%), Gaps = 5/850 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    tttcaaagaatgataaagtcttggcggtcaaattagcagcatactggcccagatgttcag 107
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9355  tttcaaagaatgataaagtcttggcggtcaaattagcagcatactggcccagatgttcag 9414

                                                                         
Query: 108   atcctggagtggcgtaaactctgactggaattctgaaatctttgcattccacgtattcta 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9415  atcctggagtggcgtaaactctgactggaattctgaaatctttgcattccacgtattcta 9474

                                                                         
Query: 168   attcagcaacgatgaaagcaaccaaataagtggacatctttggagttggattgaaatatg 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9475  attcagcaacgatgaaagcaaccaaataagtggacatctttggagttggattgaaatatg 9534

                                                                         
Query: 228   tgaatttcttaccatcaaaaatctcttcttttttcacgtccatattggacaaatgggtca 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9535  tgaatttcttaccatcaaaaatctcttcttttttcacgtccatattggacaaatgggtca 9594

                                                                         
Query: 288   actttggatccgaaaccaaagtaatttcgaaagaagccttcaaattaggttcatcaaaac 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9595  actttggatccgaaaccaaagtaatttcgaaagaagccttcaaattaggttcatcaaaac 9654

                                                                         
Query: 348   atgggaacgctctacgagcatcagtaggttccatttgtgtagtagccatgtatttcgtct 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9655  atgggaacgctctacgagcatcagtaggttccatttgtgtagtagccatgtatttcgtct 9714

                                                                         
Query: 408   cacctgtagcgttgtcgatatatttggcacggtaaaacccagccatagtatcgtttaaga 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9715  cacctgtagcgttgtcgatatatttggcacggtaaaacccagccatagtatcgtttaaga 9774

                                                                         
Query: 468   taccagtgaatttgatatcaattgtcacattatcagagtccttcaaagtcccagctggaa 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9775  taccagtgaatttgatatcaattgtcacattatcagagtccttcaaagtcccagctggaa 9834

                                                                         
Query: 528   acttgaacctactggtctgattctcttcatcagtgacagtttctagtgatttaacatcgt 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9835  acttgaacctactggtctgattctcttcatcagtgacagtttctagtgatttaacatcgt 9894

                                                                         
Query: 588   taatcttagcttcgtgaatattcaattcaaaagtgttcaactcaacanaatcactttcct 647
             ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 9895  taatcttagcttcgtgaatatccaattcaaaagtgttcaactcaacaaaatcactttcct 9954

                                                                         
Query: 648   tgtcgttaac-ttcaaatcaatgcttaccgta-catcaaac-tgaatgtatcgaaatatg 704
             |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 9955  tgtcgttaactttcaaatcaatgcttaccgtaccatcaaacttgaatgtatcgaaatatg 10014

                                                                         
Query: 705   gctccaattgcaatttgtagtgcaatggactcaccattttgaggcaatatattacgatca 764
             ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 10015 gctccaattgcaatttgtagtgcaatggactca-cattttgaggcaatataatacgatca 10073

                                                                         
Query: 765   ggttgactanacatattgnngtttgaagttaactgaggcttcccctgtctgaaaaaggga 824
             ||||||||| ||||||||  ||||| |  | |||| |  |||| ||||||||||| ||||
Sbjct: 10074 ggttgactagacatattg-tgtttgtatgttactgtgctttcctctgtctgaaaagggga 10132

                                                                         
Query: 825   acttttaatgaacctttacccgaaaaaaaaggctcaagaacaggagtaagaacctttatt 884
             |||||| | ||| | ||||||||||||||| ||| ||  |||||||| ||||||| ||||
Sbjct: 10133 actttttaagaaaccttacccgaaaaaaaaagctaaaagacaggagttagaacctctatt 10192

                       
Query: 885   ttccctcact 894
             ||| ||||||
Sbjct: 10193 ttcgctcact 10202


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7448
Number of Sequences: 1807
Number of extensions: 7448
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)