BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZH08RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1705 1413 0.0 >3x_Contig1705 Length = 16734 Score = 1413 bits (713), Expect = 0.0 Identities = 820/850 (96%), Gaps = 5/850 (0%) Strand = Plus / Plus Query: 48 tttcaaagaatgataaagtcttggcggtcaaattagcagcatactggcccagatgttcag 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9355 tttcaaagaatgataaagtcttggcggtcaaattagcagcatactggcccagatgttcag 9414 Query: 108 atcctggagtggcgtaaactctgactggaattctgaaatctttgcattccacgtattcta 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9415 atcctggagtggcgtaaactctgactggaattctgaaatctttgcattccacgtattcta 9474 Query: 168 attcagcaacgatgaaagcaaccaaataagtggacatctttggagttggattgaaatatg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9475 attcagcaacgatgaaagcaaccaaataagtggacatctttggagttggattgaaatatg 9534 Query: 228 tgaatttcttaccatcaaaaatctcttcttttttcacgtccatattggacaaatgggtca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9535 tgaatttcttaccatcaaaaatctcttcttttttcacgtccatattggacaaatgggtca 9594 Query: 288 actttggatccgaaaccaaagtaatttcgaaagaagccttcaaattaggttcatcaaaac 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9595 actttggatccgaaaccaaagtaatttcgaaagaagccttcaaattaggttcatcaaaac 9654 Query: 348 atgggaacgctctacgagcatcagtaggttccatttgtgtagtagccatgtatttcgtct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9655 atgggaacgctctacgagcatcagtaggttccatttgtgtagtagccatgtatttcgtct 9714 Query: 408 cacctgtagcgttgtcgatatatttggcacggtaaaacccagccatagtatcgtttaaga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9715 cacctgtagcgttgtcgatatatttggcacggtaaaacccagccatagtatcgtttaaga 9774 Query: 468 taccagtgaatttgatatcaattgtcacattatcagagtccttcaaagtcccagctggaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9775 taccagtgaatttgatatcaattgtcacattatcagagtccttcaaagtcccagctggaa 9834 Query: 528 acttgaacctactggtctgattctcttcatcagtgacagtttctagtgatttaacatcgt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9835 acttgaacctactggtctgattctcttcatcagtgacagtttctagtgatttaacatcgt 9894 Query: 588 taatcttagcttcgtgaatattcaattcaaaagtgttcaactcaacanaatcactttcct 647 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 9895 taatcttagcttcgtgaatatccaattcaaaagtgttcaactcaacaaaatcactttcct 9954 Query: 648 tgtcgttaac-ttcaaatcaatgcttaccgta-catcaaac-tgaatgtatcgaaatatg 704 |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 9955 tgtcgttaactttcaaatcaatgcttaccgtaccatcaaacttgaatgtatcgaaatatg 10014 Query: 705 gctccaattgcaatttgtagtgcaatggactcaccattttgaggcaatatattacgatca 764 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 10015 gctccaattgcaatttgtagtgcaatggactca-cattttgaggcaatataatacgatca 10073 Query: 765 ggttgactanacatattgnngtttgaagttaactgaggcttcccctgtctgaaaaaggga 824 ||||||||| |||||||| ||||| | | |||| | |||| ||||||||||| |||| Sbjct: 10074 ggttgactagacatattg-tgtttgtatgttactgtgctttcctctgtctgaaaagggga 10132 Query: 825 acttttaatgaacctttacccgaaaaaaaaggctcaagaacaggagtaagaacctttatt 884 |||||| | ||| | ||||||||||||||| ||| || |||||||| ||||||| |||| Sbjct: 10133 actttttaagaaaccttacccgaaaaaaaaagctaaaagacaggagttagaacctctatt 10192 Query: 885 ttccctcact 894 ||| |||||| Sbjct: 10193 ttcgctcact 10202 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7448 Number of Sequences: 1807 Number of extensions: 7448 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)