BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZH11FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1642 1546 0.0 >3x_Contig1642 Length = 16641 Score = 1546 bits (780), Expect = 0.0 Identities = 821/831 (98%), Gaps = 3/831 (0%) Strand = Plus / Minus Query: 85 aatacgagaatatttacatttattgaccgtctctaaaaagcttttccaacagcagtatgg 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2596 aatacgagaatatttacatttattgaccgtctctaaaaagcttttccaacagcagtatgg 2537 Query: 145 ttaaacttgaccgtgttgctattactcaggaacttgtagacctaccttgttagcagtctt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2536 ttaaacttgaccgtgttgctattactcaggaacttgtagacctaccttgttagcagtctt 2477 Query: 205 ttgaactttttttttttgtgacattttcaatcctggattatatctttcgatcaactgctc 264 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2476 ttgaactttttcctcttgtgacattttcaatcctggattatatctttcgatcaactgctc 2417 Query: 265 gtattcactttgattgacaacaaaggccgcaatatctttcaaatgttgaagagaacgcgg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2416 gtattcactttgattgacaacaaaggccgcaatatctttcaaatgttgaagagaacgcgg 2357 Query: 325 gtcatctttcagcgatagaacaatatctttgagatgtttgctatggctgtaaaataatag 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2356 gtcatctttcagcgatagaacaatatctttgagatgtttgctatggctgtaaaataatag 2297 Query: 385 ctctttagatttcaatgggtccttagtcttcaaaatttcaattttttttccaaccgcact 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2296 ctctttagatttcaatgggtccttagtcttcaaaatttcaattttttttccaaccgcact 2237 Query: 445 gagctgttttaataccttgcttcttgccattgcatctaggcccttctcctgctgttgtct 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2236 gagctgttttaataccttgcttcttgccattgcatctaggcccttctcctgctgttgtct 2177 Query: 505 cactaattggatcctattgtatgtcaataaggctatttgtttctttgtatcttgctgtag 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2176 cactaattggatcctattgtatgtcaataaggctatttgtttctttgtatcttgctgtag 2117 Query: 565 ttgttggattttattgtgcttcgcactacggacaagtgatctcaatagtgacttatatgt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2116 ttgttggattttattgtgcttcgcactacggacaagtgatctcaatagtgacttatatgt 2057 Query: 625 cgataacgttagctcactcattgtatgatccttaatatattctatattatcactgctctg 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2056 cgataacgttagctcactcattgtatgatccttaatatattctatattatcactgctctg 1997 Query: 685 tgagataatgataagtggagatatcctataatgcctattataatatgtcaaggcagagta 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1996 tgagataatgataagtggagatatcctataatgcctattataatatgtcaaggcagagta 1937 Query: 745 ctctcataacatgctagaatcaccaatctaatacagaactcatcgaaacattnttcaaca 804 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1936 ctctcataacatgctagaatcaccaatctaatacagaactcatcgaaacatttttcaaca 1877 Query: 805 gtcaaatctctctttaactgtcgatccagaacacgtgaaaactttttcacgtttcttctg 864 |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 1876 gtcaaatctctctttaactgtcgatccagatcacgtgaaacctttttcacgtttcttctg 1817 Query: 865 taaatctgaaga-atatttcatt-cgggt-atgattcgtggtttttttttg 912 |||||||||||| |||||||||| ||||| |||||||||| |||||||||| Sbjct: 1816 taaatctgaagatatatttcattccgggtaatgattcgtgttttttttttg 1766 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,623 Number of Sequences: 1807 Number of extensions: 12623 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)