BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZH11RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1394 1546 0.0 >3x_Contig1394 Length = 5721 Score = 1546 bits (780), Expect = 0.0 Identities = 847/866 (97%), Gaps = 3/866 (0%) Strand = Plus / Minus Query: 46 atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4912 atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 4853 Query: 106 agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4852 agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 4793 Query: 166 catcagggattggttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4792 catcagggattggttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 4733 Query: 226 catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4732 catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 4673 Query: 286 tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4672 tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 4613 Query: 346 agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4612 agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 4553 Query: 406 ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4552 ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 4493 Query: 466 atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4492 atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 4433 Query: 526 tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4432 tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 4373 Query: 586 catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattatgtcctttgg 645 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4372 catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattaggtcctttgg 4313 Query: 646 gcgtacgtgtcattaacatgattacaggatgtgtagccacagacatcgctgantagaaga 705 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 4312 gcgtacgtgtcattaacatgattacaggaggtgtagccacagacatcgctgataagaaga 4253 Query: 706 cattaccagaaggtagtatcttcaacttcccggnaggtatcaaagccgttgaaaccccgt 765 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4252 cattaccagaaggtagtatcttcaacttcccggagggtatcaaagccgttgaaacccgta 4193 Query: 766 agaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagataaccggtg- 824 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 4192 agaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagagaaacggtga 4133 Query: 825 atgatttcgaatacgccagcattgaccccgtggatatataccgggggatcgat-gccacg 883 ||||| ||||| ||| |||||||||||| ||||||||||||| ||||| |||| |||||| Sbjct: 4132 atgatatcgaaaacggcagcattgacccggtggatatatacc-ggggaacgatggccacg 4074 Query: 884 gtagtgaaatggttaatgctactgat 909 |||||||||||||||||||||||||| Sbjct: 4073 gtagtgaaatggttaatgctactgat 4048 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4790 Number of Sequences: 1807 Number of extensions: 4790 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)