BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZH11RM1.SCF screened BAC_end
         (909 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1394                                                        1546   0.0  

>3x_Contig1394 
          Length = 5721

 Score = 1546 bits (780), Expect = 0.0
 Identities = 847/866 (97%), Gaps = 3/866 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4912 atcgacattctactctaagcatagtcccttacgaataccgtaaaagataatctaattcat 4853

                                                                        
Query: 106  agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4852 agagagcacaaaaacatatcaatatgagtgagacaaaatatgctttggtcactggtgcat 4793

                                                                        
Query: 166  catcagggattggttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4792 catcagggattggttatgaagtcacaaaggagttattgaggagagggtggtacgtgtacg 4733

                                                                        
Query: 226  catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4732 catgtgccagaagaacacatcctatggaggaattaagagccgagtttggagatagatgca 4673

                                                                        
Query: 286  tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4672 tccctaggaaacttgatgtttcgaatcagaatgatatcacccagttgaagttgaagttgg 4613

                                                                        
Query: 346  agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4612 agcaagaattaccagatcagaagctacatctattatataataacgctggccaaagctgct 4553

                                                                        
Query: 406  ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552 ctctgcccgcaatagacgtgagcgaagaaatcatcgataatacattcagagtaaacgttt 4493

                                                                        
Query: 466  atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 atggacccatcaactcatgtcgtgaattcgcaccattaatcataaacgctaaggggacaa 4433

                                                                        
Query: 526  tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 tcgtcttcactgggtcattagctgggatatgtccatttccgtttggagcagtgtacagcg 4373

                                                                        
Query: 586  catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattatgtcctttgg 645
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4372 catcaaaggctgcgattcatcaatacgctcgggtgttacacggagaattaggtcctttgg 4313

                                                                        
Query: 646  gcgtacgtgtcattaacatgattacaggatgtgtagccacagacatcgctgantagaaga 705
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||
Sbjct: 4312 gcgtacgtgtcattaacatgattacaggaggtgtagccacagacatcgctgataagaaga 4253

                                                                        
Query: 706  cattaccagaaggtagtatcttcaacttcccggnaggtatcaaagccgttgaaaccccgt 765
            |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||   
Sbjct: 4252 cattaccagaaggtagtatcttcaacttcccggagggtatcaaagccgttgaaacccgta 4193

                                                                        
Query: 766  agaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagataaccggtg- 824
            |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 4192 agaagatgtcagagaagaatcaaccgatgtcaccagctgattacgcaagagaaacggtga 4133

                                                                        
Query: 825  atgatttcgaatacgccagcattgaccccgtggatatataccgggggatcgat-gccacg 883
            ||||| ||||| ||| |||||||||||| ||||||||||||| ||||| |||| ||||||
Sbjct: 4132 atgatatcgaaaacggcagcattgacccggtggatatatacc-ggggaacgatggccacg 4074

                                      
Query: 884  gtagtgaaatggttaatgctactgat 909
            ||||||||||||||||||||||||||
Sbjct: 4073 gtagtgaaatggttaatgctactgat 4048


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4790
Number of Sequences: 1807
Number of extensions: 4790
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)