BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZA01FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1071 1505 0.0 >3x_Contig1071 Length = 4881 Score = 1505 bits (759), Expect = 0.0 Identities = 784/793 (98%) Strand = Plus / Plus Query: 88 tctatttcatttagtaattgcaagtttgggctcttattgtatacatcatcatgtgagatg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2517 tctatttcatttagtaattgcaagtttgggctcttattgtatacatcatcatgtgagatg 2576 Query: 148 tcaaaattatacccatcggtgtaaacacactcagatagacctctcatcttgcacccagta 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2577 tcaaaattatacccatcggtgtaaacacactcagatagacctctcatcttgcacccagta 2636 Query: 208 cacatgggacttttacgatcacacttcaatttacgtttacgacaaaaagtgcatgattta 267 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2637 cacatgggacgcttacgatcacacttcaatttacgtttacgacaaaaagtgcatgattta 2696 Query: 268 ataactttccttctctttcttactttgccattactcgtgctagcgttcttatcgctataa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2697 ataactttccttctctttcttactttgccattactcgtgctagcgttcttatcgctataa 2756 Query: 328 tgttcctcatcgttgttatgactgccgatcccagcgctttcttcagaatttcccgttcca 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2757 tgttcctcatcgttgttatgactgccgatcccagcgctttcttcagaatttcccgttcca 2816 Query: 388 atatcttgtgccgcttcatttttgttataaagaacgctcatttcggtagcaaaatcagat 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2817 atatcttgtgccgcttcatttttgttataaagaacgctcatttcggtagcaaaatcagat 2876 Query: 448 attgcatcgtcattggttgatttcttacaagctgtctgagtctcgttagaattttggccc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2877 attgcatcgtcattggttgatttcttacaagctgtctgagtctcgttagaattttggccc 2936 Query: 508 tccaaaggtcctttactcataatgtaaacaaccaaaatggaacaacagaccaacaaatgc 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2937 tccaaaggtcctttactcataatgtaaacaaccaaaatggaacaacagaccaacaaatgc 2996 Query: 568 cccccaagtataaaaagctaatcaacaactatttcttgactgggagaaaaaaaaagatca 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2997 cccccaagtataaaaagctaatcaacaactatttcttgactgggagaaaaaaaaagatca 3056 Query: 628 atagtacttgaattgttacaacaaatgcattagcaacaataccaatccacctcttaaact 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3057 atagtacttgaattgttacaacaaatgcattagcaacaataccaatccacctcttaaact 3116 Query: 688 gatattggtaacttctgaattatcagccggctctctctgccatcatatataaaaatatga 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3117 gatattggtaacttctgaattatcagccggctctctctgccatcatatataaaaatatga 3176 Query: 748 ctgaatttgnattgaaaaggtcttttgtacttacttngaaatataaactaacagaaacaa 807 ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 3177 ctgaatttgattgaaaaaggtcttttgtacttacttgaaaatataaactaacagaaacaa 3236 Query: 808 aaatgacgaaatgcaacaaatcaacaattctacttgtaagacttgcatgaaactcatgta 867 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3237 aaatgacgaaatgcaacaaatcaacaattctacttgtaagacttgcatgaaactcatgta 3296 Query: 868 acgtatgaagtcc 880 |||||||| |||| Sbjct: 3297 acgtatgaggtcc 3309 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7678 Number of Sequences: 1807 Number of extensions: 7678 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)