BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZA02FM1.SCF screened BAC_end
         (926 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1793                                                        1572   0.0  

>3x_Contig1793 
          Length = 40499

 Score = 1572 bits (793), Expect = 0.0
 Identities = 829/837 (99%), Gaps = 3/837 (0%)
 Strand = Plus / Minus

                                                                         
Query: 85    ataccaagaactagcagaatagcttctaagctccgaattgcgatatcctgtatccctgcc 144
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25477 ataccaagaactagcagaatagcttctaagctccgaattgcgatatcctgtatccctgcc 25418

                                                                         
Query: 145   catttcttcattaccatcagctcggatcatctagggtgccagtttgaattagttatggca 204
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25417 catttcttcattaccatcagctcggatcatctagggtgccagtttgaattagttatggca 25358

                                                                         
Query: 205   ttcggaagctttaacggtgaccccttctcgctctgtccgtccatctgagatagtgggatg 264
             |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25357 ttcggaagcgcaaacggtgaccccttctcgctctgtccgtccatctgagatagtgggatg 25298

                                                                         
Query: 265   ttctgttttgtggaattgcggagcatgatcaccatgcgggtaacaaataatttgttttcg 324
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25297 ttctgttttgtggaattgcggagcatgatcaccatgcgggtaacaaataatttgttttcg 25238

                                                                         
Query: 325   tcttttttttttctttcgtaggagatagaatgaatagctcggttggtacaaataaagtat 384
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25237 tcttttttttttctttcgtaggagatagaatgaatagctcggttggtacaaataaagtat 25178

                                                                         
Query: 385   tatacagatttctatcaaaaatattcttcagacagtttcagaatgtcaaatttgaagata 444
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25177 tatacagatttctatcaaaaatattcttcagacagtttcagaatgtcaaatttgaagata 25118

                                                                         
Query: 445   tatgcgattacaaagttatctgccatttgctgttgaattcaatgaccgcagtgtgaacta 504
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25117 tatgcgattacaaagttatctgccatttgctgttgaattcaatgaccgcagtgtgaacta 25058

                                                                         
Query: 505   acttgtataagtatcttctttcttcgtcctttggaactgagaagaagtattctctttcag 564
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25057 acttgtataagtatcttctttcttcgtcctttggaactgagaagaagtattctctttcag 24998

                                                                         
Query: 565   ctgtatatatcgtaatgccagtcttgattacccttacatttcttatcattctgaatggga 624
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24997 ctgtatatatcgtaatgccagtcttgattacccttacatttcttatcattctgaatggga 24938

                                                                         
Query: 625   tatgctccatcacagtcaacgtagataattgcatacgtagaattctttgtagggatacga 684
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24937 tatgctccatcacagtcaacgtagataattgcatacgtagaattctttgtagggatacga 24878

                                                                         
Query: 685   tcactatttgataaccagctggcgtctcacatatcacatgacctacgtacatatctttgg 744
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24877 tcactatttgataaccagctggcgtctcacatatcacatgacctacgtacatatctttgg 24818

                                                                         
Query: 745   catattccccaccattacaagtctttaaccaatattgaccttgcgaatctcttaaattgt 804
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24817 catattccccaccattacaagtctttaaccaatattgaccttgcgaatctcttaaattgt 24758

                                                                         
Query: 805   aaggtttgattaatttatcagaactaacgaaccttggtagcctaactctttcaatttgtc 864
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24757 aaggtttgattaatttatcagaactaacgaaccttggtagcctaactctttcaatttgtc 24698

                                                                      
Query: 865   cgatatccatttaggggtgttgaaatttctaatacctttcactcacattactggcaa 921
             ||||||||| ||| || ||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 24697 cgatatcca-ttaaggttgttg-aatttctaatacc-ttcactcacattactggcaa 24644


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8086
Number of Sequences: 1807
Number of extensions: 8086
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)