BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZA03RM1.SCF screened BAC_end (969 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1527 914 0.0 >3x_Contig1527 Length = 8131 Score = 914 bits (461), Expect = 0.0 Identities = 519/537 (96%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 52 ctttcactctcttgagtcacactttttctactaatatttcttagagttgtttttcttcct 111 |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 6266 ctttcact-tcttgagtcacactttaactactaatatttcttagagttgtttttcttcct 6324 Query: 112 gattccttaccctttttcaagggttctagcatcagtgtagatattcagctcatttccttc 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6325 gattccttaccctttttcaagggttctagcatcagtgtagatattcagctcatttccttc 6384 Query: 172 actttttttcttttggtgtttaatgtcgctagggtatcttttataaatatgtcccctcgg 231 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6385 actttttctcttttggtgtttaatgtcgctagggtatcttttataaatatgtccccactt 6444 Query: 232 gtacgcacctacgtgtatgtaactaatttttgatatgtttttagattttccggtgtttat 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6445 gtacgcacctacgtgtatgtaactaatttttgatatgtttttagattttccggtgtttat 6504 Query: 292 gaaactgaaaaaaccgcttcgagtaagagttaatgttattgttaagacgtgggtcacaac 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6505 gaaactgaaaaaaccgcttcgagtaagagttaatgttattgttaagacgtgggtcacaac 6564 Query: 352 ctaaacgtactggcctatcatagacatactataggtacaccgctctattaccatcttcta 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6565 ctaaacgtactggcctatcatagacatactataggtacaccgctctattaccatcttcta 6624 Query: 412 acaatcatataccgaagtgtctgtgatgggtacaggtccatatccttctgcagaagagct 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6625 acaatcatataccgaagtgtctgtgatgggtacaggtccatatccttctgcagaagagct 6684 Query: 472 gaatgcttcactcatctgtgatgatgaggaaacacaagcctatgaaatgagagatatgtt 531 ||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 6685 gaatgctccactcatctgtgatgatgaggaagcacaagcttatgaaatgagagatatgtt 6744 Query: 532 accgggcccagattccacccgcaatctcaccgaaactggcgatgaccttcgggaatt 588 ||||| || ||| | ||| |||||||||||||||||||||||||| | |||||||| Sbjct: 6745 accggcccaggatacgaccagcaatctcaccgaaactggcgatgacatacgggaatt 6801 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7386 Number of Sequences: 1807 Number of extensions: 7386 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 969 length of database: 10,358,551 effective HSP length: 16 effective length of query: 953 effective length of database: 10,329,639 effective search space: 9844145967 effective search space used: 9844145967 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)