BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZA04FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1479 1404 0.0 >3x_Contig1479 Length = 7316 Score = 1404 bits (708), Expect = 0.0 Identities = 772/791 (97%), Gaps = 2/791 (0%) Strand = Plus / Plus Query: 88 ctgaaaaatcccttttctgaattggaatctgccacttggactttaccgttttgtggttga 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3934 ctgaaaaatcccttttctgaattggaatctgccacttggactttaccgttttgtggttga 3993 Query: 148 ttctgttgaaattgatactgtggttgttgttgacgattttgtgagaattgttgttgtgaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3994 ttctgttgaaattgatactgtggttgttgttgacgattttgtgagaattgttgttgtgaa 4053 Query: 208 gtatcattgtt-gttgacttttgagctttctgttgcgttggttgtggttgttgagcgtaa 266 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4054 gtatcattgtttggtgacttttgagctttctgttgcgttggttgtggttgttgagcgtaa 4113 Query: 267 cgttgttggacttgctgcttgtaagcttcgtatgacatagggtccagcctttgttgtgtg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4114 cgttgttggacttgctgcttgtaagcttcgtatgacatagggtccagcctttgttgtgtg 4173 Query: 327 tgttgttgatattgttgttgagacatgatctgttgtggttgttgaggggcattgctaaca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4174 tgttgttgatattgttgttgagacatgatctgttgtggttgttgaggggcattgctaaca 4233 Query: 387 ccttgagttaaatcggttccaccaggtaatggggaatgtgattgtaagggaacgtttgat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4234 ccttgagttaaatcggttccaccaggtaatggggaatgtgattgtaagggaacgtttgat 4293 Query: 447 ccgttcaaattgtttaccgctaatggaacttggttaaacttatttctatgtctcttactc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4294 ccgttcaaattgtttaccgctaatggaacttggttaaacttatttctatgtctcttactc 4353 Query: 507 ttttcattcggaggagttgggtgaccatatccgtgcaagttaggtttcttgttaatggcc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4354 ttttcattcggaggagttgggtgaccatatccgtgcaagttaggtttcttgttaatggcc 4413 Query: 567 agatcccaaccacgaccaccgtttaatttcatccaatcgtattctccgtccaatttctgt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4414 agatcccaaccacgaccaccgtttaatttcatccaatcgtattctccgtccaatttctgt 4473 Query: 627 cctaattcatccaatactgancataatagtttacggtaaccttcataatccggagtctct 686 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4474 cctaattcatccaatactgacaataatagtttacggtaaccttcataatccggagtctct 4533 Query: 687 tcgaaacccaagtttcttacaattttccaataacgaccaaattgaactggtaacccttgt 746 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 4534 tcgaaacccaagtttcttacaatttccaaataacgaccaaattgaactggtaacccttgt 4593 Query: 747 gataaatcgtacacgtttgttgatctctttttttaacc-attttttcatatttcaactta 805 |||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct: 4594 gataaatcgtacacgtttgttgatctctttttttcaccaatcttttcatatttcaactta 4653 Query: 806 ttattagctgctttaaccctttgccttggttattgacctcttaaggaataagaaattacg 865 |||||||||||||| | || ||||| |||| |||||||||||| | |||| ||| |||| Sbjct: 4654 ttattagctgcttttaacccttgccatggtaattgacctcttaggaaatagaaaaatacg 4713 Query: 866 tgtcccaatgc 876 ||||||||||| Sbjct: 4714 tgtcccaatgc 4724 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7163 Number of Sequences: 1807 Number of extensions: 7163 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)