BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZA05FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1785 1584 0.0 >3x_Contig1785 Length = 37935 Score = 1584 bits (799), Expect = 0.0 Identities = 831/840 (98%), Gaps = 2/840 (0%) Strand = Plus / Plus Query: 85 ttggttcaatttagattggtttgatgctaagccaagataatatatctaaagtatataaga 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18305 ttggttcaatttagattggtttgatgctaagccaagataatatatctaaagtatataaga 18364 Query: 145 attacaaacagtgtataaaccaaatctaactgtgtaaactgcacaaactaatccttcata 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18365 attacaaacagtgtataaaccaaatctaactgtgtaaactgcacaaactaatccttcata 18424 Query: 205 acgcgaatgnctant-tatcttttcatctcgcagctgcttatatatacacatattaacat 263 ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18425 acgcgaatgtctattctatcttttcatctcgcagctgcttatatatacacatattaacat 18484 Query: 264 atacatgaggaatactgtatgattcactacagcatataccatactggtaaatttctcaac 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18485 atacatgaggaatactgtatgattcactacagcatataccatactggtaaatttctcaac 18544 Query: 324 tgaaattgaaaaaaaaaattccagctgaaaaagtaactttggagaaatttgactgcaatt 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18545 tgaaattgaaaaaaaaaattccagctgaaaaagtaactttggagaaatttgactgcaatt 18604 Query: 384 aggtacagacttttaagttttagagagagcatactgcgtaagactgataatagagggaaa 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18605 aggtacagacttttaagttttagagagagcatactgcgtaagactgataatagagggaaa 18664 Query: 444 aaaataaagtgctcgagataaaggttgtcacttaacgataacgactggaatggctacatc 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18665 aaaataaagtgctcgagataaaggttgtcacttaacgataacgactggaatggctacatc 18724 Query: 504 tttacatcgtaatatctttagatcttgtgactattcttcacagggtttctagttttaagt 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18725 tttacatcgtaatatctttagatcttgtgactattcttcacagggtttctagttttaagt 18784 Query: 564 tgatttctgtaattaaggtgtcaatgagaatatgccatgcagtggtcagcatcgcggtaa 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18785 tgatttctgtaattaaggtgtcaatgagaatatgccatgcagtggtcagcatcgcggtaa 18844 Query: 624 gtaacggttagtgatgctgttatttccgaggcaaatgtctttgttattttaggcattggg 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18845 gtaacggttagtgatgctgttatttccgaggcaaatgtctttgttattttaggcattggg 18904 Query: 684 tttcctggtttgactttttgccctgtcggtgtttcgttttcttttttcaactacggtaaa 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18905 tttcctggtttgactttttgccctgtcggtgtttcgttttcttttttcaactacggtaaa 18964 Query: 744 gtacggttagttgcgggtactatggggtagttgcggtattggagagttcgatccatgact 803 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18965 gtacggttagttgcggtaactatggggtagttgcggtattggagagttcgatccatgact 19024 Query: 804 cagggcctattatgtgacttcttaccacggnaaattgtgacccatgtatttncttttgtc 863 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 19025 cagggcctattatgtgacttcttaccacgg-aaattgtgacccatgtatttccttttgtc 19083 Query: 864 gttgacaggttttcatgttaacagccttttgttattagtcacgcgatatatatatatcac 923 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 19084 gttgacaggttttcatgttaacaggcttttggtattagtcacgcgatatatatatatcac 19143 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,611 Number of Sequences: 1807 Number of extensions: 10611 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)