BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZA05RM1.SCF screened BAC_end (986 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig731 844 0.0 >3x_Contig731 Length = 3248 Score = 844 bits (426), Expect = 0.0 Identities = 448/454 (98%), Gaps = 1/454 (0%) Strand = Plus / Minus Query: 49 aatttccaatttaagtgttatgaacctctctcctggtccagtcttaaaccctctaatgta 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1493 aatttccaatttaagtgttatgaacctctctcctggtccagtcttaaaccctctaatgta 1434 Query: 109 tcctacatcgctaaagccatttcagcttagaaagtgtaaaagacaataccttgatggaaa 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1433 tcctacatcgctaaagccatttcagcttagaaagtgtaaaagacaataccttgatggaaa 1374 Query: 169 taacgacaagttgtacagaaagtagcgcacagcgtcttgttttaacggtataatatatat 228 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 1373 taacgacaagttgtacagaaagtagcgcacagcgtcttgttttaacggcagaatatatat 1314 Query: 229 atacagtttaatctcataacaaccgcagttgtccccaaataccttattgttcccatctct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1313 atacagtttaatctcataacaaccgcagttgtccccaaataccttattgttcccatctct 1254 Query: 289 agtgatgaaaacttttcttcatcattactgatgggcaacatacatgaaaaaaaattgtaa 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 agtgatgaaaacttttcttcatcattactgatgggcaacatacatgaaaaaaaattgtaa 1194 Query: 349 aatctctaattcatcaacttacctttaccagcgaataattcaacgacaggcaactctatc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 aatctctaattcatcaacttacctttaccagcgaataattcaacgacaggcaactctatc 1134 Query: 409 tcattctatttcctaatccaaaatcgtgtattaactgaacttgggattcatatcttaata 468 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1133 tcattctatttcctaatccaaaatcgtgtattaactgaacttggtattcatatcttaata 1074 Query: 469 atataatattgtttaattttttctatttttcttt 502 |||||||| ||||| | ||||||||||||||||| Sbjct: 1073 atataata-tgttttaatttttctatttttcttt 1041 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,257 Number of Sequences: 1807 Number of extensions: 13257 Number of successful extensions: 132 Number of sequences better than 1.0e-20: 1 length of query: 986 length of database: 10,358,551 effective HSP length: 16 effective length of query: 970 effective length of database: 10,329,639 effective search space: 10019749830 effective search space used: 10019749830 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)