BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZA09FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1220 1451 0.0 >3x_Contig1220 Length = 4729 Score = 1451 bits (732), Expect = 0.0 Identities = 775/786 (98%), Gaps = 3/786 (0%) Strand = Plus / Minus Query: 86 tggtgtaccgtccgcattccaggtttcgaaatacctataattcaaatgggtggttggcgc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4258 tggtgtaccgtccgcattccaggtttcgaaatacctataattcaaatgggtggttggcgc 4199 Query: 146 atgtggattaattggatgaataaccatagagagaccacaggcgaagaattttactcctgt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4198 atgtggattaattggatgaataaccatagagagaccacaggcgaagaattttactcctgt 4139 Query: 206 tgcatctggttcaccagttgcaggatcaataggcagatgcaaatttttgtggtccgcttt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4138 tgcatctggttcaccagttgcaggatcaataggcagatgcaaatttttgtggtccgcttt 4079 Query: 266 catagccttgatagcaggtggactcaagttcccatgaaccacactgacattaacaccacc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4078 catagccttgatagcaggtggactcaagttcccatgaaccacactgacattaacaccacc 4019 Query: 326 tttctcaaacgtagtaccattctgcaacaccatcgagacaccgccaccaccgttgttgcc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4018 tttctcaaacgtagtaccattctgcaacaccatcgagacaccgccaccaccgttgttgcc 3959 Query: 386 acgatcccaagaatcggcttgaaactttacagtatccaaagtttccagacccttggtaat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3958 acgatcccaagaatcggcttgaaactttacagtatccaaagtttccagacccttggtaat 3899 Query: 446 ttcttgctgtttccggcgcactaaggcctccattctctctctaattggcacttgtgaatc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3898 ttcttgctgtttccggcgcactaaggcctccattctctctctaattggcacttgtgaatc 3839 Query: 506 tgtcatcgcacaatgataatatttagaatgtgtgttaagatgaaccggtcgttgagtttc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3838 tgtcatcgcacaatgataatatttagaatgtgtgttaagatgaaccggtcgttgagtttc 3779 Query: 566 tgtttgctttaccagacaagtatacnggatgtaaagttttatcaatgattctgcttgatt 625 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3778 tgtttgctttaccagacaagtatactggatgtaaagttttatcaatgattctgcttgatt 3719 Query: 626 ggagagaaaagggcagtatagatccaatgcttctcttctcatttcagttggtgagtcgaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3718 ggagagaaaagggcagtatagatccaatgcttctcttctcatttcagttggtgagtcgaa 3659 Query: 686 tggaataattcactttcgttaatatagtca-aaaaaaaaaatccaaaaagcaagcagact 744 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3658 tggaataattcactttcgttaatatagtcaaaaaaaaaaaatccaaaaagcaagcagact 3599 Query: 745 tcaagattcagacctggtgataatttggataaaggtaattgaagaaaaaa-gctagctag 803 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3598 tcaagattcagacctggtgataatttggataaaggtaattgaagaaaaaaggctagctag 3539 Query: 804 tttccaccgcttacaggnagnaggaaaagatccgagataccaggattttatcacaatagt 863 |||||||||| |||||| || |||||||||| |||||||| || || | ||||||||||| Sbjct: 3538 tttccaccgcatacaggaag-aggaaaagatacgagatacaagaatctcatcacaatagt 3480 Query: 864 ggcagt 869 |||||| Sbjct: 3479 ggcagt 3474 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,214 Number of Sequences: 1807 Number of extensions: 11214 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)