BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZA09RM1.SCF screened BAC_end
         (971 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1490                                                        1322   0.0  

>3x_Contig1490 
          Length = 9411

 Score = 1322 bits (667), Expect = 0.0
 Identities = 794/828 (95%), Gaps = 7/828 (0%)
 Strand = Plus / Plus

                                                                        
Query: 50   acaaggccattcacaaaattgttgatatcagaatcaaagacttggagaagcaatttgcgg 109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 acaaggccattcacaaaattgttgatatcagaatcaaagacttggagaagcaatttgcgg 3576

                                                                        
Query: 110  ataatgataagaattacaagatcaacgtttcaccaccagctcgggatttcttgaccaaga 169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 ataatgataagaattacaagatcaacgtttcaccaccagctcgggatttcttgaccaaga 3636

                                                                        
Query: 170  atggttactcggaggatatgggtgctaggccattgaacagattaattcataaccgagatt 229
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3637 atggttactcggaggatatgggtgctaggccattgaacagattaattca-aaccgagatt 3695

                                                                        
Query: 230  ttgaacccaatggcaatccatatcttgaagggtgagatcaaagacaaagaaattgtcaat 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3696 ttgaacccaatggcaatccatatcttgaagggtgagatcaaagacaaagaaattgtcaat 3755

                                                                        
Query: 290  gtagaagtgggtgccgatggatctcatttagaagttttaccaaatcacccagcttcatca 349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3756 gtagaagtgggtgccgatggatctcatttagaagttttaccaaatcacccagcttcatca 3815

                                                                        
Query: 350  gaaattggtgatgaagacatggatttggacttggacgacgatgacgacttagacctagac 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3816 gaaattggtgatgaagacatggatttggacttggacgacgatgacgacttagacctagac 3875

                                                                        
Query: 410  tgatctaaaatgaattacaaaaagaaaacatacaaacaaactcactcagtaataaaattt 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3876 tgatctaaaatgaattacaaaaagaaaacatacaaacaaactcactcagtaataaaattt 3935

                                                                        
Query: 470  cagttcaacagtaccatcatatatagtgtaaagtacatatttttttcactttctttagta 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3936 cagttcaacagtaccatcatatatagtgtaaagtacatatttttttcactttctttagta 3995

                                                                        
Query: 530  taatattntgacttttacatgttttcatgttcataagaagtgcataccaatggtgctgct 589
            ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 3996 taatattttgacttttacatgttttcatgttcataagaggtgcaaaccaatggtgctgct 4055

                                                                        
Query: 590  gntattcataacagcgtactaactaagcattctggctgagtttgtattacaatgttac-t 648
            | ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 4056 gttattcatacaagcgtactaactaagcattctggctgagtttgtattac-atgttactt 4114

                                                                        
Query: 649  agatgggcagggttttttcagcctttttcactgatttnccaagtcagttagttccaattt 708
            |||||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||
Sbjct: 4115 agatgggcagggttctttcagcctttttcactgatttcccaagtcagtaag-tccaattt 4173

                                                                        
Query: 709  tggccatgattcaaaagaatttgatgggtcctttttcaaatcatgctttttttcctcacg 768
            ||  ||||||||||||||||||||| |||| || |||||||||||| || ||||||||||
Sbjct: 4174 tgcacatgattcaaaagaatttgattggtctttcttcaaatcatgc-ttctttcctcacg 4232

                                                                        
Query: 769  aatgttaatcttcggcttttttcctcttttttcctcgttccccgggagttattggcctga 828
            |||||||||||||||||||||||||||| || ||||||| ||  ||||||||||| ||||
Sbjct: 4233 aatgttaatcttcggcttttttcctcttcttccctcgtt-ccgtggagttattgg-ctga 4290

                                                            
Query: 829  taaacaatccatttacctttggttctgggcatcgttaaaaatgcttgg 876
              ||||  |||| ||||||| ||||||||||||| |||| ||||||||
Sbjct: 4291 gtaacatcccatatacctttcgttctgggcatcgctaaacatgcttgg 4338


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9232
Number of Sequences: 1807
Number of extensions: 9232
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)