BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZA09RM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1490 1322 0.0 >3x_Contig1490 Length = 9411 Score = 1322 bits (667), Expect = 0.0 Identities = 794/828 (95%), Gaps = 7/828 (0%) Strand = Plus / Plus Query: 50 acaaggccattcacaaaattgttgatatcagaatcaaagacttggagaagcaatttgcgg 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3517 acaaggccattcacaaaattgttgatatcagaatcaaagacttggagaagcaatttgcgg 3576 Query: 110 ataatgataagaattacaagatcaacgtttcaccaccagctcgggatttcttgaccaaga 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3577 ataatgataagaattacaagatcaacgtttcaccaccagctcgggatttcttgaccaaga 3636 Query: 170 atggttactcggaggatatgggtgctaggccattgaacagattaattcataaccgagatt 229 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3637 atggttactcggaggatatgggtgctaggccattgaacagattaattca-aaccgagatt 3695 Query: 230 ttgaacccaatggcaatccatatcttgaagggtgagatcaaagacaaagaaattgtcaat 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3696 ttgaacccaatggcaatccatatcttgaagggtgagatcaaagacaaagaaattgtcaat 3755 Query: 290 gtagaagtgggtgccgatggatctcatttagaagttttaccaaatcacccagcttcatca 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3756 gtagaagtgggtgccgatggatctcatttagaagttttaccaaatcacccagcttcatca 3815 Query: 350 gaaattggtgatgaagacatggatttggacttggacgacgatgacgacttagacctagac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3816 gaaattggtgatgaagacatggatttggacttggacgacgatgacgacttagacctagac 3875 Query: 410 tgatctaaaatgaattacaaaaagaaaacatacaaacaaactcactcagtaataaaattt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3876 tgatctaaaatgaattacaaaaagaaaacatacaaacaaactcactcagtaataaaattt 3935 Query: 470 cagttcaacagtaccatcatatatagtgtaaagtacatatttttttcactttctttagta 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3936 cagttcaacagtaccatcatatatagtgtaaagtacatatttttttcactttctttagta 3995 Query: 530 taatattntgacttttacatgttttcatgttcataagaagtgcataccaatggtgctgct 589 ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 3996 taatattttgacttttacatgttttcatgttcataagaggtgcaaaccaatggtgctgct 4055 Query: 590 gntattcataacagcgtactaactaagcattctggctgagtttgtattacaatgttac-t 648 | |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 4056 gttattcatacaagcgtactaactaagcattctggctgagtttgtattac-atgttactt 4114 Query: 649 agatgggcagggttttttcagcctttttcactgatttnccaagtcagttagttccaattt 708 |||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 4115 agatgggcagggttctttcagcctttttcactgatttcccaagtcagtaag-tccaattt 4173 Query: 709 tggccatgattcaaaagaatttgatgggtcctttttcaaatcatgctttttttcctcacg 768 || ||||||||||||||||||||| |||| || |||||||||||| || |||||||||| Sbjct: 4174 tgcacatgattcaaaagaatttgattggtctttcttcaaatcatgc-ttctttcctcacg 4232 Query: 769 aatgttaatcttcggcttttttcctcttttttcctcgttccccgggagttattggcctga 828 |||||||||||||||||||||||||||| || ||||||| || ||||||||||| |||| Sbjct: 4233 aatgttaatcttcggcttttttcctcttcttccctcgtt-ccgtggagttattgg-ctga 4290 Query: 829 taaacaatccatttacctttggttctgggcatcgttaaaaatgcttgg 876 |||| |||| ||||||| ||||||||||||| |||| |||||||| Sbjct: 4291 gtaacatcccatatacctttcgttctgggcatcgctaaacatgcttgg 4338 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9232 Number of Sequences: 1807 Number of extensions: 9232 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)