BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZB04RM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1667 961 0.0 >3x_Contig1667 Length = 12071 Score = 961 bits (485), Expect = 0.0 Identities = 578/601 (96%), Gaps = 6/601 (0%) Strand = Plus / Minus Query: 48 ctgctatatgtatccctgccatggcactaggagattcgattagtatatctataccttgac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6622 ctgctatatgtatccctgccatggcactaggagattcgattagtatatctataccttgac 6563 Query: 108 atccctcccaagctgtatccaacagagatgagatccaagtagaaaagtttgtagaagcgt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6562 atccctcccaagctgtatccaacagagatgagatccaagtagaaaagtttgtagaagcgt 6503 Query: 168 ccctcaataaacccatgttcattgatccatgctgtaccatcaaagatattagttctgcag 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6502 ccctcaataaacccatgttcattgatccatgctgtaccatcaaagatattagttctgcag 6443 Query: 228 gattaccagatatttctctaaatcctatattatgagaaactatccaatccttaaattctc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6442 gattaccagatatttctctaaatcctatattatgagaaactatccaatccttaaattctc 6383 Query: 288 catgagttagtataataacttcatgaccttcggcttgcaaaccctttgccaatgcaatat 347 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 6382 catgagttagtataataacttcatga-cttcggcttgcaaaccctttgccaatgcaatat 6324 Query: 348 atggttgtacatcacctcttgaaccgattgtaagtaatccgaatttgtagcttttactag 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6323 atggttgtacatcacctcttgaaccgattgtaagtaatccgaatttgtagcttttactag 6264 Query: 408 gtttgattacagtggtgaaatacgggtttttttcaacgattaatggaatatcaaagcctt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6263 gtttgattacagtggtgaaatacgggtttttttcaacgattaatggaatatcaaagcctt 6204 Query: 468 gttcactaattttttcttctaataatttgagactcgcagcttttgagaggcgggggaaca 527 |||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 6203 gttcactaattttttcttctaataatttgagactcgcagcttctgagaggc-ggtgaaca 6145 Query: 528 ac-tcaactgtagactttcgttttaacggtgaccgatgactactttacggattcatgact 586 || ||| |||||||||||||||||| || |||||||||||||||| | || ||||||| Sbjct: 6144 acttcagctgtagactttcgttttagcgttgaccgatgactacttacagcatccatgact 6085 Query: 587 ttaat-attac-aactc-ccattattttgaacattcttggtaccaaattctaagaatagt 643 ||||| || || ||||| | || || | || |||||||| |||||||||||||||||||| Sbjct: 6084 ttaatcatcacaaactcacaatcatctcgagcattcttgttaccaaattctaagaatagt 6025 Query: 644 t 644 | Sbjct: 6024 t 6024 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6909 Number of Sequences: 1807 Number of extensions: 6909 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)