BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZB07RM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1406 1261 0.0 >3x_Contig1406 Length = 8172 Score = 1261 bits (636), Expect = 0.0 Identities = 668/676 (98%), Gaps = 2/676 (0%) Strand = Plus / Minus Query: 49 gcaagatcttctagagtcctgatctctatatgggcattactgttattagcagccgctaga 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7299 gcaagatcttctagagtcctgatctctatatgggcattactgttattagcagccgctaga 7240 Query: 109 aaacggcgagttacgactcttttcaccaacggtctgaacattattgttctactatctatg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7239 aaacggcgagttacgactcttttcaccaacggtctgaacattattgttctactatctatg 7180 Query: 169 tcaacttcttccaaatagaaaaaacggtacgaatataccaaagtgtgtgtttacaccgtt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7179 tcaacttcttccaaatagaaaaaacggtacgaatataccaaagtgtgtgtttacaccgtt 7120 Query: 229 cactaactgcaatggaaacaaattctgaagctcgcagtatgcctttgtgatccctacgtg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7119 cactaactgcaatggaaacaaattctgaagctcgcagtatgcctttgtgatccctacgtg 7060 Query: 289 tgtactgtaatctccccaggttctttacttcatcagctcctctcgaaaaattgatcatct 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7059 tgtactgtaatctccccaggttctttacttcatcagctcctctcgaaaaattgatcatct 7000 Query: 349 taaattcctatttacaatattcattttacttaaaaatataccgagaggacagaaatagag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6999 taaattcctatttacaatattcattttacttaaaaatataccgagaggacagaaatagag 6940 Query: 409 tagatacgaaaagattagtaggtaccgctgcctctgacccatgtacaattgctgggtaaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6939 tagatacgaaaagattagtaggtaccgctgcctctgacccatgtacaattgctgggtaaa 6880 Query: 469 aacgcttaatccttgtacaaaccataagtttgtttagctttccatacttcaaatcttgat 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6879 aacgcttaatccttgtacaaaccataagtttgtttagctttccatacttcaaatcttgat 6820 Query: 529 ctctgttgcaattcggccatcttactatggtagaaaccattgttgtgggagttgtcggaa 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6819 ctctgttgcaattcggccatcttactatggtagaaaccattgttgtgggagttgtcggaa 6760 Query: 589 gttccatcacttctaatgacagaaccgatactcataaatatgcccaaagtggcagcagga 648 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 6759 gttccatcacttctaatgacagaaccgatactcataaataggccaaaagtggcagcagaa 6700 Query: 649 ccagcgatgtactggcctaaagttctcacaaacccgttttggacctgggcccttgtgtta 708 |||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||||| | Sbjct: 6699 ccagcgatgtactgccctaaggttctcacaaacccg-tttggacctggg-ccttgtgtaa 6642 Query: 709 caatggcaacaccacc 724 |||||||||||||||| Sbjct: 6641 caatggcaacaccacc 6626 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7176 Number of Sequences: 1807 Number of extensions: 7176 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)