BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZB11RM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1807                                                        1461   0.0  

>3x_Contig1807 
          Length = 66587

 Score = 1461 bits (737), Expect = 0.0
 Identities = 829/856 (96%), Gaps = 4/856 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    cggaatttcggaatttctgaattcgagccattatagtcaaaagaaacagaataataaaaa 107
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31714 cggaatttcggaatttcggaattcgagccattatagtcaaaagaaacagaataataaaaa 31773

                                                                         
Query: 108   agccactgacattatttttatctgttgtgccttctgtacaacaggaagatgacaaaataa 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31774 agccactgacattatttttatctgttgtgccttctgtacaacaggaagatgacaaaataa 31833

                                                                         
Query: 168   gagtttaagtgctaacaatggtttactaacggcgtaaaaggtattgacatacggaagaaa 227
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 31834 gagtttaagtgctaacaatggtttactaacggcgtaaaaggtattgacaaacggaagaaa 31893

                                                                         
Query: 228   caatgaaagttaggaatcatttactcaggttggtactgacataaaattctctttagagga 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31894 caatgaaagttaggaatcatttactcaggttggtactgacataaaattctctttagagga 31953

                                                                         
Query: 288   acagcgataattgctcatcttcattattggagatttttcctagatacgattttcttttgt 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31954 acagcgataattgctcatcttcattattggagatttttcctagatacgattttcttttgt 32013

                                                                         
Query: 348   ggcaaacctcgaattgaagggtctagttggactaagatcaccagataatctgctaccacg 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32014 ggcaaacctcgaattgaagggtctagttggactaagatcaccagataatctgctaccacg 32073

                                                                         
Query: 408   tctgttgcctttgcctcgcaatttgaaattgccttacgcccgatgccatccctttaacgt 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32074 tctgttgcctttgcctcgcaatttgaaattgccttacgcccgatgccatccctttaacgt 32133

                                                                         
Query: 468   ttgagtttctgagtgatgcgatgccaaaagtgcctctagaattttttcagaaacctttgt 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32134 ttgagtttctgagtgatgcgatgccaaaagtgcctctagaattttttcagaaacctttgt 32193

                                                                         
Query: 528   gtattttcgggaacgttttcatggtaagaacacactggacaaaatcaatagaaggcatgc 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32194 gtattttcgggaacgttttcatggtaagaacacactggacaaaatcaatagaaggcatgc 32253

                                                                         
Query: 588   cagtataacatatgcggtaatggacattttgtctttttcagttntctttctctttgttag 647
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 32254 cagtataacatatgcggtaatggacattttgtctttttcagttttctttctctttgtttg 32313

                                                                         
Query: 648   ntccttgctgc-anaaatatgaagcgtaactaagacttcatttcctacttccctagcaca 706
              |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32314 ttccttgctgcaaaaaatatgaagcgtaactaagacttcatttcctacttccctagcaca 32373

                                                                         
Query: 707   cttatcaatgaatctgttnctacttctcattagtaaaagcgaagagtagcttatgat-aa 765
             |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 32374 cttatcaatgaatctgtttctacttctcattagtaaaagcgaggagtagcttatgataaa 32433

                                                                         
Query: 766   attaactatgtcattgcagcagacacgataagttttccatncctatgtttacccgacttt 825
             |||||||||||||||||||||||||||||| |||| |||  | ||  |||||||||| | 
Sbjct: 32434 attaactatgtcattgcagcagacacgataggtttcccagccttagttttacccgacata 32493

                                                                         
Query: 826   attcatgcaatcacccccgactggggtctgtgaggataaatgcgcatatttaagacgttt 885
             ||||||||||||| |||||||||| ||||||||| | ||||||||||||| | |||| ||
Sbjct: 32494 attcatgcaatca-ccccgactggtgtctgtgagaaaaaatgcgcatattaaggacg-tt 32551

                             
Query: 886   gcctactcaaattgat 901
             | ||||||||||||||
Sbjct: 32552 ggctactcaaattgat 32567


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6082
Number of Sequences: 1807
Number of extensions: 6082
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)