BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZB12FM1.SCF screened BAC_end
         (919 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1765                                                        1507   0.0  

>3x_Contig1765 
          Length = 24733

 Score = 1507 bits (760), Expect = 0.0
 Identities = 817/832 (98%), Gaps = 4/832 (0%)
 Strand = Plus / Minus

                                                                         
Query: 86    actaacatttaatgatgatccaaatgcaacagttaacaagaaatgt-aaccaagattgat 144
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 16397 actaacatttaatgatgatccaaatgcaacagttaacaagaaatgtcaaccaagattgat 16338

                                                                         
Query: 145   aaaattt-atacacctgtagaggttgaaaagcaaacgcttttattacagcaagtatatga 203
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16337 aaaattttatacacctgtagaggttgaaaagcaaacgcttttattacagcaagtatatga 16278

                                                                         
Query: 204   acttatatctttttttt-cagtcaggtgcagtcatctttcttagtaactcctccatcttt 262
             ||||||||||     |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16277 acttatatctcagcgtaacagtcaggtgcagtcatctttcttagtaactcctccatcttt 16218

                                                                         
Query: 263   attaatggactcaggtgataacgaagatattcaaatcatatacaagaactacgccacgtt 322
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16217 attaatggactcaggtgataacgaagatattcaaatcatatacaagaactacgccacgtt 16158

                                                                         
Query: 323   atacttcacatttatagttgatgaacaagaatcagaactagcaatcttagatttgattca 382
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16157 atacttcacatttatagttgatgaacaagaatcagaactagcaatcttagatttgattca 16098

                                                                         
Query: 383   aacgtttgtagaggcattggataaatgtttcgaagaagtgaatgagctagacttaatctt 442
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16097 aacgtttgtagaggcattggataaatgtttcgaagaagtgaatgagctagacttaatctt 16038

                                                                         
Query: 443   caattggcaaacattggaaagtgtacttgaagagattatccaaggtggattggtgataga 502
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16037 caattggcaaacattggaaagtgtacttgaagagattatccaaggtggattggtgataga 15978

                                                                         
Query: 503   gaccaatgtaaggaaaatcgtaagtgctgtagatgaattgaataacgctaatgaaagtga 562
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15977 gaccaatgtaaggaaaatcgtaagtgctgtagatgaattgaataacgctaatgaaagtga 15918

                                                                         
Query: 563   aaattctttcaccaaactagcagggaatcgaatctctgaggcgttccaggcgttcagnta 622
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 15917 aaattctttcaccaaactagcagggaatcgaatctctgaggcgttccaggcgttcagtta 15858

                                                                         
Query: 623   ttcaaatttcagtgcttgggggtcacatcaatgataaatcagaaaataaccccgctatct 682
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15857 ttcaaatttcagtgcttgggggtcacatcaatgataaatcagaaaataaccccgctatct 15798

                                                                         
Query: 683   taacgccaatgtcatattaatgttgataggccttgcagcataatagttaatagtggatta 742
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15797 taacgccaatgtcatattaatgttgataggccttgcagcataatagttaatagtggatta 15738

                                                                         
Query: 743   taataatatcatatgaataaataaagtcgaaactcatggaaaaattatatacactccatt 802
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15737 taataatatcatatgaataaataaagtcgaaactcatggaaaaattatatacactccatt 15678

                                                                         
Query: 803   gatttcgaaaacaacgataaataatatctacaggcggttagtaaagtaactttcagat-a 861
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 15677 gatttcgaaaacaacgataaataatatctacaggcggttagtaaagtaactttcagataa 15618

                                                                 
Query: 862   ccgattcatcaacgtggatggatnggntttcgccataaagnttgaggaaaaa 913
             ||||||||||||||||||||||| || || |||||||||| |||||||||||
Sbjct: 15617 ccgattcatcaacgtggatggattggtttccgccataaagtttgaggaaaaa 15566


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8095
Number of Sequences: 1807
Number of extensions: 8095
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)