BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZC01RM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 1112 0.0 >3x_Contig1794 Length = 36744 Score = 1112 bits (561), Expect = 0.0 Identities = 625/645 (96%), Gaps = 1/645 (0%) Strand = Plus / Minus Query: 48 cttcctacgtgtgccatttgcgaaagcagtgacgggtttcaagttcgaatcgggacgaag 107 |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31337 cttcttacgtgttccatttgcaaaagcagtgacgggtttcaagttcgaatcgggacgaag 31278 Query: 108 agttaaacctaaggtcaccggcgttgttgtcgagaatgaatacgtcgacgcattggttgc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31277 agttaaacctaaggtcaccggcgttgttgtcgagaatgaatacgtcgacgcattggttgc 31218 Query: 168 tgtaatagaaaatatcgaagaatgtaacgatgatgcagctagacatgaattagatcttga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31217 tgtaatagaaaatatcgaagaatgtaacgatgatgcagctagacatgaattagagcttga 31158 Query: 228 ggctttgaacggctggtcactccttcttaccaaactcaggatcaaaagtagattggttga 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31157 ggctttgaacggctggtcactccttcttaccaaactcaggatcaaaagtagattggttga 31098 Query: 288 agaacatggtgcggtggcagatgaagacggcagagattactctggtgaaagagatagcga 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31097 agaacatggtgcggtggcagatgaagacggcagagattactctggtgaaagagatagcga 31038 Query: 348 tctagaagatcacgaatcatatacgggagaagacacagaaatgggcggtttcgaacaagg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31037 tctagaagatcacgaatcatatacgggagaagacacagaaatgggcggtttcgaacaagg 30978 Query: 408 tgggttccttcttgattctaatatggatggtggattcgtgcctgaaccagaattacaaca 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30977 tgggttccttcttgattctaatatggatggtggattcgtgcctgaaccagaattacaaca 30918 Query: 468 tgcagaatctgaaacagaacaagttgaacatccacctgtgacctatggtgaagcaactct 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30917 tgcagaatctgaaacagaacaagttgaacatccacctgtgacctatggtgaagcaactct 30858 Query: 528 agaccgcgcctgaccaagtaacacggagccaaacgaaatcgctgatgagtttcgacagtt 587 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 30857 agaccgcgctgaaccaagtaacacggagccaaacgaaatcgctgatgagttcgaacagtt 30798 Query: 588 cttgccatgagttggatcgcattccgatgacgatgattcatttcattttg-atcagaata 646 ||||| | |||||||||||| || |||||||||||||||||||| | || ||||||||| Sbjct: 30797 cttgcaagaagttggatcgcaatcggatgacgatgattcatttcaatatgaatcagaata 30738 Query: 647 aatttcaagatcacgtgaactattagtggagcgtatctaatgact 691 ||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 30737 aatctcaagatcacgtgaactattagtgtagcgtatctaatgact 30693 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6698 Number of Sequences: 1807 Number of extensions: 6698 Number of successful extensions: 27 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)