BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZC02FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1258 1501 0.0 >3x_Contig1258 Length = 6899 Score = 1501 bits (757), Expect = 0.0 Identities = 801/811 (98%), Gaps = 4/811 (0%) Strand = Plus / Minus Query: 89 ctctacggctgccacatttattgaatagcaacgaaatcgcaaaacgcgaatcataataaa 148 |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 5453 ctcttcggctgccacattt-ttgaatagcaa-gaaatcgcaaaacgcgaatcataataaa 5396 Query: 149 ttgaaaagcgcaactgaagtatcagatatattggaatctgaatttgctactcaaaaatca 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5395 ttgaaaagcgcaactgaagtatcagatatattggaatctgaatttgctactcaaaaatca 5336 Query: 209 tggaacggtatctttgcaaaaactacaactcaaatgtctggtattactgctcttatgaat 268 |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5335 tggaacgggagcgttgcaaaaactacaactcaaatgtctggtattactgctcttatgaat 5276 Query: 269 gaaactaaaaaactggaaaatactattaccccaccttggtcatcaaggcgattaattcat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5275 gaaactaaaaaactggaaaatactattaccccaccttggtcatcaaggcgattaattcat 5216 Query: 329 caattatacgaacagagtgttgcttcaggaaatatcctactaacgatggcaattttgtta 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5215 caattatacgaacagagtgttgcttcaggaaatatcctactaacgatggcaattttgtta 5156 Query: 389 ttatttcaagatatgtttcaacttgttgatacagagacagttaagaattctatagcggaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5155 ttatttcaagatatgtttcaacttgttgatacagagacagttaagaattctatagcggaa 5096 Query: 449 tttaccgaattattgcaccggtacgagctatttgagattgcagcggagttgatgaaaaac 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5095 tttaccgaattattgcaccggtacgagctatttgagattgcagcggagttgatgaaaaac 5036 Query: 509 tgtccttacgaggatatttctagttcaagtgctggcttttcctccattcagttattctgt 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5035 tgtccttacgaggatatttctagttcaagtgctggcttttcctccattcagttattctgt 4976 Query: 569 gataaatgcaataaacctttagttaacgaatcttccaaggagaaaataatcaaagaaaga 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4975 gataaatgcaataaacctttagttaacgaatcttccaaggagaaaataatcaaagaaaga 4916 Query: 629 cttgaaggaaattcaagtgctatgtccaggtttggatactggtactgcgattcatgttct 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4915 cttgaaggaaattcaagtgctatgtccaggtttggatactggtactgcgattcatgttct 4856 Query: 689 aagcgcaatactctctgttgcttctgcaataaaccaatgaagagcttggctatttctatg 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4855 aagcgcaatactctctgttgcttctgcaataaaccaatgaagagcttggctatttctatg 4796 Query: 749 cttaactgtgggcatgagggtcacttcgagtgtttgaaaaaatggttttttgacg-aaac 807 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4795 cttaactgtgggcatgagggtcacttcgagtgtttgaaaaaatggttttttgacgaaaac 4736 Query: 808 atggatgtatgcccattgggatgcccagcaatcttattctgaagtcaattt-ctgttaat 866 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4735 atggatgtatgcccattgggatgcccagcaatcttattctgaagtcaatttcctgttaat 4676 Query: 867 ncggatctttnctatatcaagttatgttttt 897 ||||||||| |||||||||||||||||||| Sbjct: 4675 tcggatcttttctatatcaagttatgttttt 4645 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7524 Number of Sequences: 1807 Number of extensions: 7524 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)