BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZC02FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1258                                                        1501   0.0  

>3x_Contig1258 
          Length = 6899

 Score = 1501 bits (757), Expect = 0.0
 Identities = 801/811 (98%), Gaps = 4/811 (0%)
 Strand = Plus / Minus

                                                                        
Query: 89   ctctacggctgccacatttattgaatagcaacgaaatcgcaaaacgcgaatcataataaa 148
            |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5453 ctcttcggctgccacattt-ttgaatagcaa-gaaatcgcaaaacgcgaatcataataaa 5396

                                                                        
Query: 149  ttgaaaagcgcaactgaagtatcagatatattggaatctgaatttgctactcaaaaatca 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5395 ttgaaaagcgcaactgaagtatcagatatattggaatctgaatttgctactcaaaaatca 5336

                                                                        
Query: 209  tggaacggtatctttgcaaaaactacaactcaaatgtctggtattactgctcttatgaat 268
            |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5335 tggaacgggagcgttgcaaaaactacaactcaaatgtctggtattactgctcttatgaat 5276

                                                                        
Query: 269  gaaactaaaaaactggaaaatactattaccccaccttggtcatcaaggcgattaattcat 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5275 gaaactaaaaaactggaaaatactattaccccaccttggtcatcaaggcgattaattcat 5216

                                                                        
Query: 329  caattatacgaacagagtgttgcttcaggaaatatcctactaacgatggcaattttgtta 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5215 caattatacgaacagagtgttgcttcaggaaatatcctactaacgatggcaattttgtta 5156

                                                                        
Query: 389  ttatttcaagatatgtttcaacttgttgatacagagacagttaagaattctatagcggaa 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5155 ttatttcaagatatgtttcaacttgttgatacagagacagttaagaattctatagcggaa 5096

                                                                        
Query: 449  tttaccgaattattgcaccggtacgagctatttgagattgcagcggagttgatgaaaaac 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5095 tttaccgaattattgcaccggtacgagctatttgagattgcagcggagttgatgaaaaac 5036

                                                                        
Query: 509  tgtccttacgaggatatttctagttcaagtgctggcttttcctccattcagttattctgt 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5035 tgtccttacgaggatatttctagttcaagtgctggcttttcctccattcagttattctgt 4976

                                                                        
Query: 569  gataaatgcaataaacctttagttaacgaatcttccaaggagaaaataatcaaagaaaga 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4975 gataaatgcaataaacctttagttaacgaatcttccaaggagaaaataatcaaagaaaga 4916

                                                                        
Query: 629  cttgaaggaaattcaagtgctatgtccaggtttggatactggtactgcgattcatgttct 688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4915 cttgaaggaaattcaagtgctatgtccaggtttggatactggtactgcgattcatgttct 4856

                                                                        
Query: 689  aagcgcaatactctctgttgcttctgcaataaaccaatgaagagcttggctatttctatg 748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4855 aagcgcaatactctctgttgcttctgcaataaaccaatgaagagcttggctatttctatg 4796

                                                                        
Query: 749  cttaactgtgggcatgagggtcacttcgagtgtttgaaaaaatggttttttgacg-aaac 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4795 cttaactgtgggcatgagggtcacttcgagtgtttgaaaaaatggttttttgacgaaaac 4736

                                                                        
Query: 808  atggatgtatgcccattgggatgcccagcaatcttattctgaagtcaattt-ctgttaat 866
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4735 atggatgtatgcccattgggatgcccagcaatcttattctgaagtcaatttcctgttaat 4676

                                           
Query: 867  ncggatctttnctatatcaagttatgttttt 897
             ||||||||| ||||||||||||||||||||
Sbjct: 4675 tcggatcttttctatatcaagttatgttttt 4645


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7524
Number of Sequences: 1807
Number of extensions: 7524
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)