BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZC03RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1629 1063 0.0 >3x_Contig1629 Length = 12481 Score = 1063 bits (536), Expect = 0.0 Identities = 570/576 (98%), Gaps = 4/576 (0%) Strand = Plus / Minus Query: 49 tccaacaaagacccac-gaggtttgagaaaggttgcttgtatcggtgcttggcatccagc 107 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9610 tccaagaaagacccacagaggtttgagaaaggttgcttgtatcggtgcttggcatccagc 9551 Query: 108 ccacgttatgtggtccgttgctagagctggtcaaagaggttaccaccacagaacctctat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9550 ccacgttatgtggtccgttgctagagctggtcaaagaggttaccaccacagaacctctat 9491 Query: 168 taaccacaaggtctacagagttggtaagggtgacgacgaagctaacgccgctaccgaatt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9490 taaccacaaggtctacagagttggtaagggtgacgacgaagctaacgccgctaccgaatt 9431 Query: 228 cgacagaaccaagaagaccatcaccccaatgggtggtttcgtccactacggtgctatcaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9430 cgacagaaccaagaagaccatcaccccaatgggtggtttcgtccactacggtgctatcaa 9371 Query: 288 caatgatttcgttatcttgaagggttctatcccaggtaccagaaagagagttgttacttt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9370 caatgatttcgttatcttgaagggttctatcccaggtaccagaaagagagttgttacttt 9311 Query: 348 aagaaagtccttgtacaccaacacctccagaaaggccttggaagaagttaccttgaagtg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9310 aagaaagtccttgtacaccaacacctccagaaaggccttggaagaagttaccttgaagtg 9251 Query: 408 gatcgacactgcttctaagttcggtaagggtagattccaaaccccagctgaaaagcacgc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9250 gatcgacactgcttctaagttcggtaagggtagattccaaaccccagctgaaaagcacgc 9191 Query: 468 tttcttgggtactttgaagaaggacttataaactcctcaactctaatagagtcgaattga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9190 tttcttgggtactttgaagaaggacttataaactcctcaactctaatagagtcgaattga 9131 Query: 528 gtaaaaagctttgcatgctgtaattttatagactagttttggagtactcaag-aagtgtt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9130 gtaaaaagctttgcatgctgtaattttatagactagttttggagtactcaagaaagtgtt 9071 Query: 587 tacactttcttt-actat-tcatcggctggttcata 620 |||||||||||| ||||| |||||||||||||||| Sbjct: 9070 tacactttctttcactatcccatcggctggttcata 9035 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8288 Number of Sequences: 1807 Number of extensions: 8288 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)