BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZC08FM1.SCF screened BAC_end (968 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1757 1007 0.0 >3x_Contig1757 Length = 24754 Score = 1007 bits (508), Expect = 0.0 Identities = 600/624 (96%), Gaps = 5/624 (0%) Strand = Plus / Minus Query: 234 ggaatgacacttgtagtatttttttgggtagggttgactggtttctgtggtggatacctg 293 |||||| ||||||||||| | |||||| || ||||||||||||||||||||| ||||| Sbjct: 18120 ggaatgtcacttgtagtaatcggttgggttggtttgactggtttctgtggtggagacctg 18061 Query: 294 atcgatcttggtacgcctctactatgaccgccgcttcttatagtaccagtagtggttcta 353 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 18060 atcgatcttggtacgcctctactaggaccgccgcttcttatagtaccagtagtggttcta 18001 Query: 354 ttatcattagtagttggtgtaagtattcctgtagcctgatatgagggagatgctttaggt 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18000 ttatcattagtagttggtgtaagtattcctgtagcctgatatgagggagatgctttaggt 17941 Query: 414 tttatcactgggacgttgatacttctcgatatttcgttgtccgtgtcagtacgtgcagga 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17940 tttatcactgggacgttgatacttctcgatatttcgttgtccgtgtcagtacgtgcagga 17881 Query: 474 acgattggtgtatctatgatcttcgtgaaatcttatctttccagttcttgtgatttagat 533 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 17880 acgattggtgtatctatgatcttcgtgaaatctttactttccagttcttgtgatttagat 17821 Query: 534 tgttccgtcttcaactgttgtacatgtcttttctgtatttgtgatacaatgttgttgaac 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17820 tgttccgtcttcaactgttgtacatgtcttttctgtatttgtgatacaatgttgttgaac 17761 Query: 594 gaattagaataggagttgaattgcgaggtattaagcgttggggccattgagaatgcgaac 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17760 gaattagaataggagttgaattgcgaggtattaagcgttggggccattgagaatgcgaac 17701 Query: 654 attagcgggatgaacgattctgtgatgagttcttttttgtcttggatagctgtgtataaa 713 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 17700 attagcgggatgaacgattctgtgatgagttcttctttgtcttggatagctgtgtataaa 17641 Query: 714 tgtgggaagaattctatgaatttcattagaatccgtgagtctctactcttcattgatttt 773 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17640 tgtgggaagaattctaggaatttcattagaatccgtgagtctctactcttcattgatttt 17581 Query: 774 atcaatggggaacacgtcttcttggatcaatgttagtatccattgccgttggattggnat 833 ||||||||| | ||||| ||||||||| |||| |||||||||| ||||||||||| || Sbjct: 17580 atcaatgggaacaacgtc-tcttggatc-atgtaggtatccattg-cgttggattgg-at 17525 Query: 834 catattttggaaagcaagatatgc 857 |||| ||||| ||||||||||||| Sbjct: 17524 catagtttgg-aagcaagatatgc 17502 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6255 Number of Sequences: 1807 Number of extensions: 6255 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 968 length of database: 10,358,551 effective HSP length: 16 effective length of query: 952 effective length of database: 10,329,639 effective search space: 9833816328 effective search space used: 9833816328 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)