BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZD01FM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1610 1578 0.0 >3x_Contig1610 Length = 13981 Score = 1578 bits (796), Expect = 0.0 Identities = 829/836 (99%), Gaps = 3/836 (0%) Strand = Plus / Plus Query: 88 tacacatggtactaaacgaaggatttgtgaaagacaagtgttagttcaatacgtcagata 147 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2456 tacacatggtactaaacga-ggatttgtgaaagacaagtgttagttcaatacgtcagata 2514 Query: 148 tcgacactcactcaaaacacaatggtttctcaattattcgaagaaaaggtatgtggaatc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2515 tcgacactcactcaaaacacaatggtttctcaattattcgaagaaaaggtatgtggaatc 2574 Query: 208 gttgttgcattggtcattgatttcccttaataatcatactaaccgcatcttacatttatc 267 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2575 gttgttgcaatggcttttgatttcccttaataatcatactaaccgcatcttacatttatc 2634 Query: 268 tgcaggctaaagctgtcaatgaattgccatcaactccaaataacgatgaattgttgaaat 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2635 tgcaggctaaagctgtcaatgaattgccatcaactccaaataacgatgaattgttgaaat 2694 Query: 328 tgtatgctctatacaagcaagcaaccgtcggtgacaacaccaaggaaaaaccaggcatgt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2695 tgtatgctctatacaagcaagcaaccgtcggtgacaacaccaaggaaaaaccaggcatgt 2754 Query: 388 tcaacttgaaggaccgttacaagtgggacgcctgggaattgttgaagggcacttcccaag 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2755 tcaacttgaaggaccgttacaagtgggacgcctgggaattgttgaagggcacttcccaag 2814 Query: 448 aagatgccgaacaacagtacatcgaattggttgaccaattgatcaagaaatacgccccat 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2815 aagatgccgaacaacagtacatcgaattggttgaccaattgatcaagaaatacgccccat 2874 Query: 508 agagctggatggtctcgcaagttattgcatcatctaactaactatctatatctacatata 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2875 agagctggatggtctcgcaagttattgcatcatctaactaactatctatatctacatata 2934 Query: 568 tattatccttgatccatatagctaatgataatacccttattactcggtttgaaacacgaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2935 tattatccttgatccatatagctaatgataatacccttattactcggtttgaaacacgaa 2994 Query: 628 ttacaagtcacgtgaacaagctaacgccaactatttacccggctatttgcagttgagtgg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2995 ttacaagtcacgtgaacaagctaacgccaactatttacccggctatttgcagttgagtgg 3054 Query: 688 caaaaaattctttcttccctagcagtatataagttaccctccgttaaacaggagcacgat 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3055 caaaaaattctttcttccctagcagtatataagttaccctccgttaaacaggagcacgat 3114 Query: 748 ccctatttttctcttcatttatggggttcatacattgttttctaggcaatatatccgggt 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3115 ccctatttttctcttcatttatggggttcatacattgttttctaggcaatatatccgggt 3174 Query: 808 aacagactcttttac-ttccatctgattccactccaaatcgtagcacaaacgcgctttac 866 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3175 aacagactcttttactttccatctgattccactccaaatcgtagcacaaacgcgctttac 3234 Query: 867 aagatgctacacagctttttncttattttttgcttattcccaagcttcaaagaatt 922 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3235 aagatgctacacagcttttt-cttattttttgcttattcccaagcttcaaagaatt 3289 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6933 Number of Sequences: 1807 Number of extensions: 6933 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)