BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZD01RM1.SCF screened BAC_end (962 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1278 1318 0.0 >3x_Contig1278 Length = 6932 Score = 1318 bits (665), Expect = 0.0 Identities = 691/697 (99%), Gaps = 2/697 (0%) Strand = Plus / Plus Query: 76 aaatgctatacaaattcacacagctatgagacaacttaagttcgccaccgtatgacatga 135 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4818 aaatgctagacaaattcacacagctatgagacaacttaagttcgccaccgtatgacatga 4877 Query: 136 tctcgaagaccgaaaactagaaaattaattcactatggggaagtttggactaccttaaac 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4878 tctcgaagaccgaaaactagaaaattaattcactatggggaagtttggactaccttaaac 4937 Query: 196 tttattcattaaaatcttaggaaatcgttcaggactaatcttctaaagtagtatggtatt 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4938 tttattcattaaaatcttaggaaatcgttcaggactaatcttctaaagtagtatggtatt 4997 Query: 256 gttttaattatagctttttcagtatatctgaaatagtaaatattaatgaagatgcatata 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4998 gttttaattatagctttttcagtatatctgaaatagtaaatattaatgaagatgcatata 5057 Query: 316 tagacgaattgaaaaaaggtactaacgacgtggggatatgaaagcattaggaatgaacgt 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5058 tagacgaattgaaaaaaggtactaacgacgtggggatatgaaagcattaggaatgaacgt 5117 Query: 376 taataatcgtggtattgtaaagtgatgaaggaactgaaacaatgaagtttgcattatttt 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5118 taataatcgtggtattgtaaagtgatgaaggaactgaaacaatgaagtttgcattatttt 5177 Query: 436 tcggtttgaagagaaatcttcaagctgcaaatgtgaaagtaaatactcaaaagatggatt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5178 tcggtttgaagagaaatcttcaagctgcaaatgtgaaagtaaatactcaaaagatggatt 5237 Query: 496 cttttatagtatctgttaacctattacaacaatagagcagcgatggcggcgataccagca 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5238 cttttatagtatctgttaacctattacaacaatagagcagcgatggcggcgataccagca 5297 Query: 556 ccggcaccgaaggtgaccttgccagcgttgttgccggattcagtcttgatccagacggat 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5298 ccggcaccgaaggtgaccttgccagcgttgttgccggattcagtcttgatccagacggat 5357 Query: 616 tgagtaccagtggtagcttgaatttggccatcaccgatttgagagactggggcaacagtt 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5358 tgagtaccagtggtagcttgaatttggccatcaccgatttgagagactggggcaacagtt 5417 Query: 676 tggacgacgttaggatcctttgatgtggtttctggaacaatggtagtggtttctggggca 735 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5418 tggacgacgttagaatcctttgatgtggtttctggagcaatggtagtggtttctggggca 5477 Query: 736 gcctgagaaagtttctggggcagcttgaggaagtttc 772 | ||||| |||||||||||||||| |||||||||||| Sbjct: 5478 g-ctgaggaagtttctggggcagc-tgaggaagtttc 5512 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6847 Number of Sequences: 1807 Number of extensions: 6847 Number of successful extensions: 69 Number of sequences better than 1.0e-20: 1 length of query: 962 length of database: 10,358,551 effective HSP length: 16 effective length of query: 946 effective length of database: 10,329,639 effective search space: 9771838494 effective search space used: 9771838494 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)