BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZD04FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig679 785 0.0 3x_Contig378 127 4e-29 >3x_Contig679 Length = 2347 Score = 785 bits (396), Expect = 0.0 Identities = 430/439 (97%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 487 ttatttatgttcgttctttggagaatgtcggatactaacatggaagttgtcatcaataat 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttatttatgttcgttctttggagaatgtcggatactaacatggaagttgtcatcaataat 60 Query: 547 gagaaaaggtttatgtcgaagtaataattagaggcattgtaattgctgtgtataaacagt 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gagaaaaggtttatgtcgaagtaataattagaggcattgtaattgctgtgtataaacagt 120 Query: 607 acactttaaagtaaggtaggagttcactggtagcaacttttgagtatatatatttacaag 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 acactttaaagtaaggtaggagttcactggtagcaacttttgagtatatatatttacaag 180 Query: 667 ataacatttaatgtgctgcccagtgtttataataaataggaagtaaaggggacaaacaag 726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ataacatttaatgtgctgcccagtgtttataataaataggaagtaaaggggacaaacaag 240 Query: 727 aaaataattgaaaaaaaaggatccattcgtagttcccaagatcacttcgcaaagttggaa 786 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 241 aaaataattgaaaaaaaaggatccattcgtagttcccaagatcacttcgcaagtttggaa 300 Query: 787 gcctcagttaagattttagaagaagccttttgctgttgtgtatagagtccaccggtgagg 846 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 301 gcctcagttaagattttagaagaggccttttgctgttgtgtatagagtccaccggtgagg 360 Query: 847 attctaattgcggctctttggttttctcaattgagaagcaaac-acaattgaactgtcaa 905 |||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||| Sbjct: 361 attctaattgcggctc-ttggttttctcaattgagaagcaaacaacaatgaacctgtcaa 419 Query: 906 tnatgccaaggcaccagct 924 | ||||||||||||||||| Sbjct: 420 taatgccaaggcaccagct 438 >3x_Contig378 Length = 1675 Score = 127 bits (64), Expect = 4e-29 Identities = 67/68 (98%) Strand = Plus / Plus Query: 86 ttaaggaatgtgggttatctcaaaggaagctgatgtatattgagtccttggttggatatt 145 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1608 ttaaagaatgtgggttatctcaaaggaagctgatgtatattgagtccttggttggatatt 1667 Query: 146 ttttcaat 153 |||||||| Sbjct: 1668 ttttcaat 1675 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7430 Number of Sequences: 1807 Number of extensions: 7430 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 2 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)