BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZD11FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1427 1443 0.0 >3x_Contig1427 Length = 10253 Score = 1443 bits (728), Expect = 0.0 Identities = 846/876 (96%), Gaps = 10/876 (1%) Strand = Plus / Plus Query: 80 gctttaaattttgacatctttgtggatcctttcgttaatgagaattctcttgcacgtacc 139 |||||||||||||||| |||||||||||||||| |||||||||||| | ||||| ||||| Sbjct: 5339 gctttaaattttgacaactttgtggatcctttcattaatgagaatttttttgcaagtacc 5398 Query: 140 aaagacgcccttcaagaattatggcccataataccaaggaatgctagtagtaaagtattc 199 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5399 aaagacgcccttcaagaattatggcccaaaataccaaggaatgctagtagtaaagtattc 5458 Query: 200 tgttggtcacatttagaatgcataattgaacaaccaatatacttctgttcgtgaacaaaa 259 ||||||||| | |||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 5459 tgttggtcagaagtagaattca-aattgaacaaccaatatacttctgttcgtgaacaaaa 5517 Query: 260 agtagcgtctacaaacactaaaaatattcccattttgctaaatatttcctccaatgaatc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5518 agtagcgtctacaaacactaaaaatattcccattttgctaaatatttcctccaatgaatc 5577 Query: 320 gcactcttcacatgtcagttccaaacgtgcggaggaatcttcatgtcatgacgatattgc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5578 gcactcttcacatgtcagttccaaacgtgcggaggaatcttcatgtcatgacgatattgc 5637 Query: 380 taatgaagcaattgctaggaaactggcaaaacgaaaaacatctgctattagaaagtcaac 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5638 taatgaagcaattgctaggaaactggcaaaacgaaaaacatctgctattagaaagtcaac 5697 Query: 440 atttcgcccgatgatcagacctagcgtaacacacgctaacatcaaggagagtttatctgc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5698 atttcgcccgatgatcagacctagcgtaacacacgctaacatcaaggagagtttatctgc 5757 Query: 500 taaccaaattgaagaagttcagtataacgatccatttttctccaatccacttgattgtaa 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5758 taaccaaattgaagaagttcagtataacgatccatttttctccaatccacttgattgtaa 5817 Query: 560 aaggctacaaacggaaatggctggtcgagtgttcaagctatcaagtgatcatatcctctt 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5818 aaggctacaaacggaaatggctggtcgagtgttcaagctatcaagtgatcatatcctctt 5877 Query: 620 taaaagaagcatccgtagtaacgatacaacagcaacattaacttcttcaggaagtgtata 679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5878 taaaagaagcatccgtagtaacgatacaacagcaacattaacttcttcaggaagtgtata 5937 Query: 680 tgcaagaagcagatggaaatatataagaccaaagccgtcttttaaaagaatagccaatgc 739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5938 tgcaagaagcagatggaaatatataagaccaaagccgtcttttaaaagaatagccaatgc 5997 Query: 740 gatgaagcctttcaaaggtaaattctcgatggtggaggggaaaacaccagaactaccatt 799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5998 gatgaagcctttcaaaggtaaattctcgatggtggaggggaaaacaccagaactaccatt 6057 Query: 800 ncgatacaagtttcagaagcat-aaatag-aaaaaataat-acgcttctaatagaatgac 856 |||||||||| ||| || |||||| |||||||||| ||||||||||||||||||| Sbjct: 6058 cggatacaagttcaagagcaataaaatagaaaaaaataataacgcttctaatagaatgac 6117 Query: 857 c--attcaccatggaaa-tcacgtcaatactcgtgaaga-aagtttccagatc--taata 910 | ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 6118 ccatttcaccatggaaattcacgtcaatactcgtgaagataagtttccagatcctaaata 6177 Query: 911 tgatgctgncaggatgatattttggaaagtgcaaga 946 |||||||| ||||||||||||||||||||||||||| Sbjct: 6178 tgatgctgtcaggatgatattttggaaagtgcaaga 6213 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7281 Number of Sequences: 1807 Number of extensions: 7281 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)