BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZD12FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1782 1487 0.0 >3x_Contig1782 Length = 24703 Score = 1487 bits (750), Expect = 0.0 Identities = 816/836 (97%), Gaps = 2/836 (0%) Strand = Plus / Plus Query: 89 catcatggaccctaccagggatcccaatttcaagtcccctcaggaactagacagtgaggc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12390 catcatggaccctaccagggatcccaatttcaagtcccctcaggaactagacagtgaggc 12449 Query: 149 acttcaatcaagcaccgatatttttttaatcggtcctattatcccatatgtgctagctga 208 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12450 acttcaatcaagcaccgatattccaaaaatcggtcctattatcccatatgtgctagctga 12509 Query: 209 ttacaatacagctttagataaaccgattcgtcctcttaagtataagaaaaatgccattaa 268 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12510 ttacaatacagctatagataaaccgattcgtcctcgtaagtataagaaaaatgccattaa 12569 Query: 269 acggaaattggcttcttcgatgacttctaccagtgacgattccaacgaacagcagcatct 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12570 acggaaattggcttcttcgatgacttctaccagtgacgattccaacgaacagcagcatct 12629 Query: 329 gtcagcaaattcgaacaatgggttcatcccgttgaaacagagggaactacagccggtgtc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12630 gtcagcaaattcgaacaatgggttcatcccgttgaaacagagggaactacagccggtgtc 12689 Query: 389 agctgaaacgagtggtgattctgaatctgaatctgaatctcctgcagaaccggcgaacgt 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12690 agctgaaacgagtggtgattctgaatctgaatctgaatctcctgcagaaccggcgaacgt 12749 Query: 449 agatttggatatagatccaaatccagaatcggatgaagttatggcttcggctccagtggc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12750 agatttggatatagatccaaatccagaatcggatgaagttatggcttcggctccagtggc 12809 Query: 509 tcatgcatccggttcggtctctggtccatctgggatggcagcagctgctgcagctgctgc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12810 tcatgcatccggttcggtctctggtccatctgggatggcagcagctgctgcagctgctgc 12869 Query: 569 atccctcgaccaagagattacttcgagaanncacaagttccaaatcgctgatttggaaga 628 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12870 atccctcgaccaagagattacttcgagaattcacaagttccaaatcgctgatttggaaga 12929 Query: 629 agtgcctcatgggattgtgcgtcaggccaacaactggaaggattatcaattcccggctca 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12930 agtgcctcatgggattgtgcgtcaggccaacaactggaaggattatcaattcccggctca 12989 Query: 689 tagactgaaacaaaggttaagaaactcaaataaattgcccttggtcattgttgcttgtgg 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12990 tagactgaaacaaaggttaagaaactcaaataaattgcccttggtcattgttgcttgtgg 13049 Query: 749 atcgttctctccaatcacgtaccttcatttgagaatgtttgagatggcattggatgcaat 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13050 atcgttctctccaatcacgtaccttcatttgagaatgtttgagatggcattggatgcaat 13109 Query: 809 ttctgaacgaaccatattttgagtcatcggtggggtactacagtcccgtaagtgacaact 868 |||||||| |||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 13110 ttctgaacagaccagatttgaagtcatcggt-gggtactacagtcccgtaagtgacaact 13168 Query: 869 attagaaaccggta-tggcaccagctcaccataaagtgcctatgtgtgaattgggc 923 || ||||||||| | |||||||||||||||||| ||||| |||||||||||||||| Sbjct: 13169 ataagaaaccgggattggcaccagctcaccatagagtgcgtatgtgtgaattgggc 13224 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5124 Number of Sequences: 1807 Number of extensions: 5124 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)