BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZD12FM1.SCF screened BAC_end
         (927 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1782                                                        1487   0.0  

>3x_Contig1782 
          Length = 24703

 Score = 1487 bits (750), Expect = 0.0
 Identities = 816/836 (97%), Gaps = 2/836 (0%)
 Strand = Plus / Plus

                                                                         
Query: 89    catcatggaccctaccagggatcccaatttcaagtcccctcaggaactagacagtgaggc 148
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12390 catcatggaccctaccagggatcccaatttcaagtcccctcaggaactagacagtgaggc 12449

                                                                         
Query: 149   acttcaatcaagcaccgatatttttttaatcggtcctattatcccatatgtgctagctga 208
             ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||
Sbjct: 12450 acttcaatcaagcaccgatattccaaaaatcggtcctattatcccatatgtgctagctga 12509

                                                                         
Query: 209   ttacaatacagctttagataaaccgattcgtcctcttaagtataagaaaaatgccattaa 268
             ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12510 ttacaatacagctatagataaaccgattcgtcctcgtaagtataagaaaaatgccattaa 12569

                                                                         
Query: 269   acggaaattggcttcttcgatgacttctaccagtgacgattccaacgaacagcagcatct 328
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12570 acggaaattggcttcttcgatgacttctaccagtgacgattccaacgaacagcagcatct 12629

                                                                         
Query: 329   gtcagcaaattcgaacaatgggttcatcccgttgaaacagagggaactacagccggtgtc 388
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12630 gtcagcaaattcgaacaatgggttcatcccgttgaaacagagggaactacagccggtgtc 12689

                                                                         
Query: 389   agctgaaacgagtggtgattctgaatctgaatctgaatctcctgcagaaccggcgaacgt 448
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12690 agctgaaacgagtggtgattctgaatctgaatctgaatctcctgcagaaccggcgaacgt 12749

                                                                         
Query: 449   agatttggatatagatccaaatccagaatcggatgaagttatggcttcggctccagtggc 508
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12750 agatttggatatagatccaaatccagaatcggatgaagttatggcttcggctccagtggc 12809

                                                                         
Query: 509   tcatgcatccggttcggtctctggtccatctgggatggcagcagctgctgcagctgctgc 568
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12810 tcatgcatccggttcggtctctggtccatctgggatggcagcagctgctgcagctgctgc 12869

                                                                         
Query: 569   atccctcgaccaagagattacttcgagaanncacaagttccaaatcgctgatttggaaga 628
             |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 12870 atccctcgaccaagagattacttcgagaattcacaagttccaaatcgctgatttggaaga 12929

                                                                         
Query: 629   agtgcctcatgggattgtgcgtcaggccaacaactggaaggattatcaattcccggctca 688
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12930 agtgcctcatgggattgtgcgtcaggccaacaactggaaggattatcaattcccggctca 12989

                                                                         
Query: 689   tagactgaaacaaaggttaagaaactcaaataaattgcccttggtcattgttgcttgtgg 748
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12990 tagactgaaacaaaggttaagaaactcaaataaattgcccttggtcattgttgcttgtgg 13049

                                                                         
Query: 749   atcgttctctccaatcacgtaccttcatttgagaatgtttgagatggcattggatgcaat 808
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13050 atcgttctctccaatcacgtaccttcatttgagaatgtttgagatggcattggatgcaat 13109

                                                                         
Query: 809   ttctgaacgaaccatattttgagtcatcggtggggtactacagtcccgtaagtgacaact 868
             ||||||||  |||| ||||  |||||||||| ||||||||||||||||||||||||||||
Sbjct: 13110 ttctgaacagaccagatttgaagtcatcggt-gggtactacagtcccgtaagtgacaact 13168

                                                                     
Query: 869   attagaaaccggta-tggcaccagctcaccataaagtgcctatgtgtgaattgggc 923
             || ||||||||| | |||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 13169 ataagaaaccgggattggcaccagctcaccatagagtgcgtatgtgtgaattgggc 13224


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5124
Number of Sequences: 1807
Number of extensions: 5124
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)