BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZE02FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig411 1594 0.0 >3x_Contig411 Length = 1533 Score = 1594 bits (804), Expect = 0.0 Identities = 826/832 (99%), Gaps = 1/832 (0%) Strand = Plus / Minus Query: 83 ctcaagaaggtcgatttctacgaatggaaacaggaccagaaccacagagatacgcaggtg 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1436 ctcaagaaggtcgatttctacgaatggaaacaggaccagaaccacagagatacgcaggtg 1377 Query: 143 atgcgtacgtaccatatccagaaccgtgaggattatcataaatataacagaatatgtggt 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1376 atgcgtacgtaccatatccagaaccgtgaggattatcataaatataacagaatatgtggt 1317 Query: 203 gatgtgcgtcttttggcacataagctatcgcttttacaacctacagatcccttccgtatc 262 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 gatgtgcgtcgtttggcacataagctatcgcttttacaacctacagatcccttccgtatc 1257 Query: 263 aagcacgagcagctcttgctagagaaactatatcatatgggcattctttcaacaaaatcc 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1256 aagcacgagcagctcttgctagagaaactatatcatatgggcattctttcaacaaaatcc 1197 Query: 323 aagatatcagcactagagaataaagttacagtctcggctttctgtcgtcgtagattgcct 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1196 aagatatcagcactagagaataaagttacagtctcggctttctgtcgtcgtagattgcct 1137 Query: 383 gtaataatgcatagattaaagatggcacagacactcaaggatgccgttcaattcattgaa 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 gtaataatgcatagattaaagatggcacagacactcaaggatgccgttcaattcattgaa 1077 Query: 443 caaggtcatgttagagtaggacctaacttgattacagatccagcatatttggtaacaagg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 caaggtcatgttagagtaggacctaacttgattacagatccagcatatttggtaacaagg 1017 Query: 503 aatttggaggattacgttacatggacagattcatccaagatcaagaagactgtactacgt 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1016 aatttggaggattacgttacatggacagattcatccaagatcaagaagactgtactacgt 957 Query: 563 tatagaaacgcggtcgatgattttgacgatgcctagattgatcctgctatacttgccttc 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 tatagaaacgcggtcgatgattttgacgatgcctagattgatcctgctatacttgccttc 897 Query: 623 ggaagtaggaaaaagggcaaaaactattattttacaaatttgaaaggaaagtaagtagta 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 ggaagtaggaaaaagggcaaaaactattattttacaaatttgaaaggaaagtaagtagta 837 Query: 683 gtggtatatatgtatcataagaaaaagtattctaattacaatcttttgcttcgagctcgg 742 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gtggtatatatgtatcataagaaaaagtattctaattacaatcttttgcttcgagctcgg 777 Query: 743 ttccaatgtatatggatatgccggataatgcatataaacacgtaaggattgtattcaaca 802 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 ttccaatgtatatggatatgccggataatgcatataaacacgtaaggattgtattcaaca 717 Query: 803 agactccaaaagaagtctaataaaacagaatggtaaaacagagggaaataatgctccctt 862 ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 716 agactccaaaagaggtctaaaaaaacagaatggtaaaacaaagggaaataatgctccctt 657 Query: 863 tacatgacattgtaattgtgtgatgagcccaactgcttt-cttaaatcttct 913 ||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 656 tacatgacattgtaattgtgtgatgagcccaactgctttgcttagatcttct 605 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6418 Number of Sequences: 1807 Number of extensions: 6418 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)