BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZE02FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig411                                                         1594   0.0  

>3x_Contig411 
          Length = 1533

 Score = 1594 bits (804), Expect = 0.0
 Identities = 826/832 (99%), Gaps = 1/832 (0%)
 Strand = Plus / Minus

                                                                        
Query: 83   ctcaagaaggtcgatttctacgaatggaaacaggaccagaaccacagagatacgcaggtg 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 ctcaagaaggtcgatttctacgaatggaaacaggaccagaaccacagagatacgcaggtg 1377

                                                                        
Query: 143  atgcgtacgtaccatatccagaaccgtgaggattatcataaatataacagaatatgtggt 202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 atgcgtacgtaccatatccagaaccgtgaggattatcataaatataacagaatatgtggt 1317

                                                                        
Query: 203  gatgtgcgtcttttggcacataagctatcgcttttacaacctacagatcccttccgtatc 262
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 gatgtgcgtcgtttggcacataagctatcgcttttacaacctacagatcccttccgtatc 1257

                                                                        
Query: 263  aagcacgagcagctcttgctagagaaactatatcatatgggcattctttcaacaaaatcc 322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 aagcacgagcagctcttgctagagaaactatatcatatgggcattctttcaacaaaatcc 1197

                                                                        
Query: 323  aagatatcagcactagagaataaagttacagtctcggctttctgtcgtcgtagattgcct 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 aagatatcagcactagagaataaagttacagtctcggctttctgtcgtcgtagattgcct 1137

                                                                        
Query: 383  gtaataatgcatagattaaagatggcacagacactcaaggatgccgttcaattcattgaa 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 gtaataatgcatagattaaagatggcacagacactcaaggatgccgttcaattcattgaa 1077

                                                                        
Query: 443  caaggtcatgttagagtaggacctaacttgattacagatccagcatatttggtaacaagg 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 caaggtcatgttagagtaggacctaacttgattacagatccagcatatttggtaacaagg 1017

                                                                        
Query: 503  aatttggaggattacgttacatggacagattcatccaagatcaagaagactgtactacgt 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 aatttggaggattacgttacatggacagattcatccaagatcaagaagactgtactacgt 957

                                                                        
Query: 563  tatagaaacgcggtcgatgattttgacgatgcctagattgatcctgctatacttgccttc 622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  tatagaaacgcggtcgatgattttgacgatgcctagattgatcctgctatacttgccttc 897

                                                                        
Query: 623  ggaagtaggaaaaagggcaaaaactattattttacaaatttgaaaggaaagtaagtagta 682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  ggaagtaggaaaaagggcaaaaactattattttacaaatttgaaaggaaagtaagtagta 837

                                                                        
Query: 683  gtggtatatatgtatcataagaaaaagtattctaattacaatcttttgcttcgagctcgg 742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  gtggtatatatgtatcataagaaaaagtattctaattacaatcttttgcttcgagctcgg 777

                                                                        
Query: 743  ttccaatgtatatggatatgccggataatgcatataaacacgtaaggattgtattcaaca 802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  ttccaatgtatatggatatgccggataatgcatataaacacgtaaggattgtattcaaca 717

                                                                        
Query: 803  agactccaaaagaagtctaataaaacagaatggtaaaacagagggaaataatgctccctt 862
            ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 716  agactccaaaagaggtctaaaaaaacagaatggtaaaacaaagggaaataatgctccctt 657

                                                                
Query: 863  tacatgacattgtaattgtgtgatgagcccaactgcttt-cttaaatcttct 913
            ||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 656  tacatgacattgtaattgtgtgatgagcccaactgctttgcttagatcttct 605


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6418
Number of Sequences: 1807
Number of extensions: 6418
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)