BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZE02RM1.SCF screened BAC_end
         (930 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1714                                                        1368   0.0  

>3x_Contig1714 
          Length = 18873

 Score = 1368 bits (690), Expect = 0.0
 Identities = 812/841 (96%), Gaps = 9/841 (1%)
 Strand = Plus / Plus

                                                                        
Query: 76   ttttgtttctactctcctcttattcatccaagttaaaaatcggattgttagtttgcaatc 135
            |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3998 ttttttttctact-tcctcttattcatccaagttaaaaatcggattgttagtttgcaatc 4056

                                                                        
Query: 136  gcagtcttttcttcaacagcgaacggccagcaaatgcgtttttgcagggtaacaacaatt 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4057 gcagtcttttcttcaacagcgaacggccagcaaatgcgtttttgcagggtaacaacaatt 4116

                                                                        
Query: 196  tgacgttataattactgcatgagattcaaacttgcgccttcactcttgtcgaatttacga 255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4117 tgacgttataattactgcatgagattcaaacttgcgccttcactcttgtcgaatttacga 4176

                                                                        
Query: 256  ggcctaaaactttgcgtagctcgaagatagcctgaaagttacgaaggtaccatagaaaaa 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4177 ggcctaaaactttgcgtagctcgaagatagcctgaaagttacgaaggtaccatagaaaaa 4236

                                                                        
Query: 316  agtaaaattggatggatgcacgaaaaagaaacagattgaaatttgattaatagtcacttt 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4237 agtaaaattggatggatgcacgaaaaagaaacagattgaaatttgattaatagtcacttt 4296

                                                                        
Query: 376  taagattgaccaacgaataaatgttggttaaattagagattggaaataatcaatagaaga 435
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4297 taagattgaccaacgaataaatgttggttaaattagagattggacataatcaatagaaga 4356

                                                                        
Query: 436  agctagcgaagttttttgctgaaagtgtttaaacagcgtggaagttcacacgaacatcag 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4357 agctagcgaagttttttgctgaaagtgtttaaacagcgtggaagttcacacgaacatcag 4416

                                                                        
Query: 496  ggcctgatttactaacagttctaatttcaacaaaaaattacgatctaagattagacatta 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4417 ggcctgatttactaacagttctaatttcaacaaaaaattacgatctaagattagacatta 4476

                                                                        
Query: 556  attttaaaggaataaaaaccacttaattgattaatttcttacctatnactaagagaggta 615
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4477 attttaaaggaataaaaaccacttaattgattaatttcttacctataactaagagaggta 4536

                                                                        
Query: 616  aaattagagtcaattataaacttaaacatcaattgccattcatttagtgcgattcttttc 675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4537 aaattagagtcaattataaacttaaacatcaattgccattcatttagtgcgattcttttc 4596

                                                                        
Query: 676  attattacacatagttagaaaagatccaatcgggtaaaaaccct-attgttttattttac 734
            ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||
Sbjct: 4597 attattacacatagttagaaaggatccaatcgggtaaaaaacctcattgttttattttac 4656

                                                                        
Query: 735  ttttaa-tccccccccgttgctgcttttaaa-aagc-aaagaagtggaaataaattcatt 791
            |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| || |
Sbjct: 4657 ttttaagtccccccccgttgctgcttttaaagaagcaaaagaagtgaaaataaatccaat 4716

                                                                        
Query: 792  agg-tagttcatcgtttgaaaca-cctttacgctttag-aaatacaaacttcccgtatgt 848
            ||| ||||||||||||||||||| ||||||||||| || ||||||||||||||  |||||
Sbjct: 4717 aggttagttcatcgtttgaaacaccctttacgcttaagaaaatacaaacttccgttatgt 4776

                                                                        
Query: 849  ctattattacttctactggtcctataaacccttccatgggatctactggtggatcgtatg 908
            ||||||| ||| |||||| |||||| | |||| | ||||  ||||||||| |||||||||
Sbjct: 4777 ctattatcactcctactgctcctatcacccctccaatggagtctactggt-gatcgtatg 4835

             
Query: 909  a 909
            |
Sbjct: 4836 a 4836


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7520
Number of Sequences: 1807
Number of extensions: 7520
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)