BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZE02RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1714 1368 0.0 >3x_Contig1714 Length = 18873 Score = 1368 bits (690), Expect = 0.0 Identities = 812/841 (96%), Gaps = 9/841 (1%) Strand = Plus / Plus Query: 76 ttttgtttctactctcctcttattcatccaagttaaaaatcggattgttagtttgcaatc 135 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3998 ttttttttctact-tcctcttattcatccaagttaaaaatcggattgttagtttgcaatc 4056 Query: 136 gcagtcttttcttcaacagcgaacggccagcaaatgcgtttttgcagggtaacaacaatt 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4057 gcagtcttttcttcaacagcgaacggccagcaaatgcgtttttgcagggtaacaacaatt 4116 Query: 196 tgacgttataattactgcatgagattcaaacttgcgccttcactcttgtcgaatttacga 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4117 tgacgttataattactgcatgagattcaaacttgcgccttcactcttgtcgaatttacga 4176 Query: 256 ggcctaaaactttgcgtagctcgaagatagcctgaaagttacgaaggtaccatagaaaaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4177 ggcctaaaactttgcgtagctcgaagatagcctgaaagttacgaaggtaccatagaaaaa 4236 Query: 316 agtaaaattggatggatgcacgaaaaagaaacagattgaaatttgattaatagtcacttt 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4237 agtaaaattggatggatgcacgaaaaagaaacagattgaaatttgattaatagtcacttt 4296 Query: 376 taagattgaccaacgaataaatgttggttaaattagagattggaaataatcaatagaaga 435 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4297 taagattgaccaacgaataaatgttggttaaattagagattggacataatcaatagaaga 4356 Query: 436 agctagcgaagttttttgctgaaagtgtttaaacagcgtggaagttcacacgaacatcag 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4357 agctagcgaagttttttgctgaaagtgtttaaacagcgtggaagttcacacgaacatcag 4416 Query: 496 ggcctgatttactaacagttctaatttcaacaaaaaattacgatctaagattagacatta 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4417 ggcctgatttactaacagttctaatttcaacaaaaaattacgatctaagattagacatta 4476 Query: 556 attttaaaggaataaaaaccacttaattgattaatttcttacctatnactaagagaggta 615 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4477 attttaaaggaataaaaaccacttaattgattaatttcttacctataactaagagaggta 4536 Query: 616 aaattagagtcaattataaacttaaacatcaattgccattcatttagtgcgattcttttc 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4537 aaattagagtcaattataaacttaaacatcaattgccattcatttagtgcgattcttttc 4596 Query: 676 attattacacatagttagaaaagatccaatcgggtaaaaaccct-attgttttattttac 734 ||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| Sbjct: 4597 attattacacatagttagaaaggatccaatcgggtaaaaaacctcattgttttattttac 4656 Query: 735 ttttaa-tccccccccgttgctgcttttaaa-aagc-aaagaagtggaaataaattcatt 791 |||||| |||||||||||||||||||||||| |||| ||||||||| |||||||| || | Sbjct: 4657 ttttaagtccccccccgttgctgcttttaaagaagcaaaagaagtgaaaataaatccaat 4716 Query: 792 agg-tagttcatcgtttgaaaca-cctttacgctttag-aaatacaaacttcccgtatgt 848 ||| ||||||||||||||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 4717 aggttagttcatcgtttgaaacaccctttacgcttaagaaaatacaaacttccgttatgt 4776 Query: 849 ctattattacttctactggtcctataaacccttccatgggatctactggtggatcgtatg 908 ||||||| ||| |||||| |||||| | |||| | |||| ||||||||| ||||||||| Sbjct: 4777 ctattatcactcctactgctcctatcacccctccaatggagtctactggt-gatcgtatg 4835 Query: 909 a 909 | Sbjct: 4836 a 4836 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7520 Number of Sequences: 1807 Number of extensions: 7520 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)