BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZE03RM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1305 1249 0.0 >3x_Contig1305 Length = 9229 Score = 1249 bits (630), Expect = 0.0 Identities = 691/702 (98%), Gaps = 7/702 (0%) Strand = Plus / Plus Query: 47 cttcaaactaagtcacctagatccttatatattaaacacgagatgtctcaagcgctcgga 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1445 cttcaaactaagtcacctagatccttatatattaaacacgagatgtctcaagcgctcgga 1504 Query: 107 gcttacagaaacgggttgagagccgcccgcgttgcttttaaaggagacttgcgcatgcta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1505 gcttacagaaacgggttgagagccgcccgcgttgcttttaaaggagacttgcgcatgcta 1564 Query: 167 atggcagcaagacaacagatgagagaaagcatggtcaatccaccaaatccagagcttcca 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1565 atggcagcaagacaacagatgagagaaagcatggtcaatccaccaaatccagagcttcca 1624 Query: 227 cctgatcaacagatcaagcttatgaacgatgttgcacagtttctaagacaaaatgtcgtt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1625 cctgatcaacagatcaagcttatgaacgatgttgcacagtttctaagacaaaatgtcgtt 1684 Query: 287 caaggtaagaggactaaggatgacaaatatcacttgaacatccataaggacactgaattg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1685 caaggtaagaggactaaggatgacaaatatcacttgaacatccataaggacactgaattg 1744 Query: 347 ggtgacaacgaaactatcaagactactaaaaagacactggcggcccaaggtggcggttgt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1745 ggtgacaacgaaactatcaagactactaaaaagacactggcggcccaaggtggcggttgt 1804 Query: 407 tgtggtggtggtgctggcttgtacaaataggcagctggaacagaatagcaaattatgagg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1805 tgtggtggtggtgctggcttgtacaaataggcagctggaacagaatagcaaattatgagg 1864 Query: 467 cagattgatgacctgtctttcccctgatttcgtcctttctgaagggactctattactcga 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1865 cagattgatgacctgtctttcccctgatttcgtcctttctgaagggactctattactcga 1924 Query: 527 ctactaactctggtgtctttgaccccagatgcgttttgcagtccctgatatggcgcattc 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1925 ctactaactctggtgtctttgaccccagatgcgttttgcagtccctgatatggcgcattc 1984 Query: 587 tgttacagtattttgcttatacacaatcattaatttacatcttcctttttcttttccttc 646 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1985 tgttacagtattttgcttatacacaatcattaatttacatctt-ctttttcttttccttc 2043 Query: 647 cccgtcagggtttcgtggaccaaatatggggaacttgatcatgtacataacgaaatattg 706 ||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||| || || Sbjct: 2044 cccgtca-ggtttcgtgaaccaaatat-gggaactttatcatgtacataacgaatta-tg 2100 Query: 707 ttggtcaacgggtctcttataatttaaatcaaactctatttt 748 ||||||||| |||||| ||| |||| |||||||||||||||| Sbjct: 2101 ttggtcaac-ggtctc-tattattt-aatcaaactctatttt 2139 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6463 Number of Sequences: 1807 Number of extensions: 6463 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)