BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZE05RM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1340 0.0 >3x_Contig1770 Length = 29267 Score = 1340 bits (676), Expect = 0.0 Identities = 772/799 (96%), Gaps = 4/799 (0%) Strand = Plus / Minus Query: 48 tgcagaaaacttggagaagctaacaaacacacatacacttccgtctgtattattttctga 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12196 tgcagaaaacttggagaagctaacaaacacacatacacttccgtctgtattattttctga 12137 Query: 108 tccagcaacgtattggtacaacttacctatatgcgcgccaggttcgaagaattccttgtt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12136 tccagcaacgtattggtacaacttacctatatgcgcgccaggttcgaagaattccttgtt 12077 Query: 168 ttcagcctataactctttcgttaatgtcggtttaaacaagaaggagaaggaaagaaaaag 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12076 ttcagcctataactctttcgttaatgtcggtttaaacaagaaggagaaggaaagaaaaag 12017 Query: 228 actgcaactatcgaaaaagaaagtagtcatgagtgatttgttaatgagtatcgatgattt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12016 actgcaactatcgaaaaagaaagtagtcatgagtgatttgttaatgagtatcgatgattt 11957 Query: 288 gatagaaaatgattatccaattcacttggattcaccaggtctaatagaagagttcaagga 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11956 gatagaaaatgattatccaattcacttggattcaccaggtctaatagaagagttcaagga 11897 Query: 348 aacattggaaaaattatactcgtccccttattattcagagtggacggacaccaagactat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11896 aacattggaaaaattatactcgtccccttattattcagagtggacggacaccaagactat 11837 Query: 408 tgaccgtgatggccctcgaacatttgcaatagattgtgaaatgtgtatgtcagaaaacgg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11836 tgaccgtgatggccctcgaacatttgcaatagattgtgaaatgtgtatgtcagaaaacgg 11777 Query: 468 acatgttctaacccgatgcagtattgtaaatttcgacggtgatctcatttatgataaatt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11776 acatgttctaacccgatgcagtattgtaaatttcgacggtgatctcatttatgataaatt 11717 Query: 528 ggtgaagcctgatgttccaattatagattatttgaccaagtacagcggaataaccgaatg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11716 ggtgaagcctgatgttccaattatagattatttgaccaagtacagcggaataaccgaaga 11657 Query: 588 aaaactacgcgacgttactactacattgaaagatgtacaggaagatcttctcnatatcat 647 |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| Sbjct: 11656 aaaactacgcgacgttactactacattgaaggatgtacaggaggatcttctcaatatcat 11597 Query: 648 tagctcaaaggatgtattaattggacattcgttgcagtcggaccttaaactgtttaagct 707 |||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 11596 tagctcaaaggatgtattaattggacattcgttgcagtcggaccttaacgttttaaagct 11537 Query: 708 aagacat-ccaatatcgttgacacgggagttatttaacgaacacaaagcaagttcttcat 766 ||||||| |||||||||||||||||| |||||||| |||| ||||||||| || || ||| Sbjct: 11536 aagacatcccaatatcgttgacacggcagttattt-acgagcacaaagcaggtcctccat 11478 Query: 767 t-agaacaaccctaaggtatttgggcttggaatatttgaatggtgatttttaaaaagatt 825 | ||| || ||||||||||||||| || |||||||||||||| |||| || |||||||| Sbjct: 11477 tcagaccagccctaaggtatttggcctcggaatatttgaatgttgatattcaaaaagata 11418 Query: 826 caagcttggggccatgatt 844 || |||| ||||||||||| Sbjct: 11417 caggctt-gggccatgatt 11400 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7325 Number of Sequences: 1807 Number of extensions: 7325 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)