BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZE06FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig382 1370 0.0 >3x_Contig382 Length = 1656 Score = 1370 bits (691), Expect = 0.0 Identities = 725/734 (98%), Gaps = 2/734 (0%) Strand = Plus / Minus Query: 84 taaatgcatgaaaaatttccaattgtaaaggccttattgtatgctgtctgcaagataaaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 taaatgcatgaaaaatttccaattgtaaaggccttattgtatgctgtctgcaagataaaa 677 Query: 144 agacaaagagagagtacgttaaaatacaaaacaaattatttccctaggaggtatcactgc 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 agacaaagagagagtacgttaaaatacaaaacaaattatttccctaggaggtatcactgc 617 Query: 204 aggaaactattttttttagagatattatagagcttttaacaattcaattgctattcatta 263 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 aggaaactatcctggatagagatattatagagcttttaacaattcaattgctattcatta 557 Query: 264 cgtgtttgattacatgaaggttctctatttatcgttgataatagactagatacagtgcaa 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 cgtgtttgattacatgaaggttctctatttatcgttgataatagactagatacagtgcaa 497 Query: 324 tgaccggttgataatgataatacaatagtaataataataatataatataaccagggacaa 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 tgaccggttgataatgataatacaatagtaataataataatataatataaccagggacaa 437 Query: 384 aaagaaaataataagatctcgaaatagttcgtgatatgattgataatggatcaaacatgg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aaagaaaataataagatctcgaaatagttcgtgatatgattgataatggatcaaacatgg 377 Query: 444 atttattctttatgtcaagacattagttttttatgcatttgtcagactgtacttctgcct 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 atttattctttatgtcaagacattagttttttatgcatttgtcagactgtacttctgcct 317 Query: 504 tgccagcgatgagagtgttctctcttattaacaaaggccaaagaggagttataaaagaac 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 tgccagcgatgagagtgttctctcttattaacaaaggccaaagaggagttataaaagaac 257 Query: 564 attaagctgagcgagataattgatgctctagattttgctgtttctgttgctgttgaactc 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 attaagctgagcgagataattgatgctctagattttgctgtttctgttgctgttgaactc 197 Query: 624 tactgcgaactgaggagacactgtataaagcagcaccttctccggtgacaccaacacctg 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tactgcgaactgaggagacactgtataaagcagcaccttctccggtgacaccaacacctg 137 Query: 684 acaacatttgttcttgttcttctgtcttgtaatccaatgcattcaaggcttcttcatcct 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 acaacatttgttcttgttcttctgtcttgtaatccaatgcattcaaggcttcttcatcct 77 Query: 744 tgttgtagtggtggaaacatagccagaacanacaaccagcaatga-aacaagc-acagcc 801 |||||||||||||||||||||||||||||| |||||||||||||| | ||||| |||||| Sbjct: 76 tgttgtagtggtggaaacatagccagaacaaacaaccagcaatgagatcaagcaacagcc 17 Query: 802 aaaccagagaatgt 815 |||||||||||||| Sbjct: 16 aaaccagagaatgt 3 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8446 Number of Sequences: 1807 Number of extensions: 8446 Number of successful extensions: 207 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)