BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZE06FM1.SCF screened BAC_end
         (910 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig382                                                         1370   0.0  

>3x_Contig382 
          Length = 1656

 Score = 1370 bits (691), Expect = 0.0
 Identities = 725/734 (98%), Gaps = 2/734 (0%)
 Strand = Plus / Minus

                                                                       
Query: 84  taaatgcatgaaaaatttccaattgtaaaggccttattgtatgctgtctgcaagataaaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 taaatgcatgaaaaatttccaattgtaaaggccttattgtatgctgtctgcaagataaaa 677

                                                                       
Query: 144 agacaaagagagagtacgttaaaatacaaaacaaattatttccctaggaggtatcactgc 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agacaaagagagagtacgttaaaatacaaaacaaattatttccctaggaggtatcactgc 617

                                                                       
Query: 204 aggaaactattttttttagagatattatagagcttttaacaattcaattgctattcatta 263
           ||||||||||  |   ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aggaaactatcctggatagagatattatagagcttttaacaattcaattgctattcatta 557

                                                                       
Query: 264 cgtgtttgattacatgaaggttctctatttatcgttgataatagactagatacagtgcaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cgtgtttgattacatgaaggttctctatttatcgttgataatagactagatacagtgcaa 497

                                                                       
Query: 324 tgaccggttgataatgataatacaatagtaataataataatataatataaccagggacaa 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgaccggttgataatgataatacaatagtaataataataatataatataaccagggacaa 437

                                                                       
Query: 384 aaagaaaataataagatctcgaaatagttcgtgatatgattgataatggatcaaacatgg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaagaaaataataagatctcgaaatagttcgtgatatgattgataatggatcaaacatgg 377

                                                                       
Query: 444 atttattctttatgtcaagacattagttttttatgcatttgtcagactgtacttctgcct 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atttattctttatgtcaagacattagttttttatgcatttgtcagactgtacttctgcct 317

                                                                       
Query: 504 tgccagcgatgagagtgttctctcttattaacaaaggccaaagaggagttataaaagaac 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgccagcgatgagagtgttctctcttattaacaaaggccaaagaggagttataaaagaac 257

                                                                       
Query: 564 attaagctgagcgagataattgatgctctagattttgctgtttctgttgctgttgaactc 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 attaagctgagcgagataattgatgctctagattttgctgtttctgttgctgttgaactc 197

                                                                       
Query: 624 tactgcgaactgaggagacactgtataaagcagcaccttctccggtgacaccaacacctg 683
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tactgcgaactgaggagacactgtataaagcagcaccttctccggtgacaccaacacctg 137

                                                                       
Query: 684 acaacatttgttcttgttcttctgtcttgtaatccaatgcattcaaggcttcttcatcct 743
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 acaacatttgttcttgttcttctgtcttgtaatccaatgcattcaaggcttcttcatcct 77

                                                                       
Query: 744 tgttgtagtggtggaaacatagccagaacanacaaccagcaatga-aacaagc-acagcc 801
           |||||||||||||||||||||||||||||| |||||||||||||| | ||||| ||||||
Sbjct: 76  tgttgtagtggtggaaacatagccagaacaaacaaccagcaatgagatcaagcaacagcc 17

                         
Query: 802 aaaccagagaatgt 815
           ||||||||||||||
Sbjct: 16  aaaccagagaatgt 3


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8446
Number of Sequences: 1807
Number of extensions: 8446
Number of successful extensions: 207
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)