BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZE12RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1275 0.0 >3x_Contig1739 Length = 22061 Score = 1275 bits (643), Expect = 0.0 Identities = 715/730 (97%), Gaps = 7/730 (0%) Strand = Plus / Plus Query: 53 aaagttgcgaagctccatagaagagaagtttgtaataatcatagaatctctcattacctc 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10332 aaagttgcgaagctccatagaagagaagtttgtaataatcatagaatctctcattacctc 10391 Query: 113 ttgagctggatttgttctgtttcattaattcacttttctcaaatgctagcatgtacatgg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10392 ttgagctggatttgttctgtttcattaattcacttttctcaaatgctagcatgtacatgg 10451 Query: 173 gcaaagttttcaaagaatctggtaagattaattgccccccagaagaaccgccacacagtg 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10452 gcaaagttttcaaagaatctggtaagattaattgccccccagaagaaccgccacacagtg 10511 Query: 233 ctctgtattgtgtaaagatttcaatgatcttgcggtcaatgttcttcctaatttcattga 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10512 ctctgtattgtgtaaagatttcaatgatcttgcggtcaatgttcttcctaatttcattga 10571 Query: 293 aattacagtcttccaatgtggctagcacatctttgatcattatgctactcaccacatctt 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10572 aattacagtcttccaatgtggctagcacatctttgatcattatgctactcaccacatctt 10631 Query: 353 ggtttataaacttgaagacttcgattacgttcgagttgacagctgcattagtattaattg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10632 ggtttataaacttgaagacttcgattacgttcgagttgacagctgcattagtattaattg 10691 Query: 413 cacgtactttacgtacaccatcgatatcagtatacaatagagctgcttggaagcatatat 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10692 cacgtactttacgtacaccatcgatatcagtatacaatagagctgcttggaagcatatat 10751 Query: 473 cttctccgacctttagagtgtcatcgtacttgaatagcacgtcgaacttttgatctctgg 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10752 cttctccgacctttagagtgtcatcgtacttgaatagcacgtcgaacttttgatctctgg 10811 Query: 533 tgagtacagggattacagggtcctcatcagtattctttacactctccgaataatagttgt 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10812 tgagtacagggattacagggtcctcatcagtattctttacactctccgaataatagttgt 10871 Query: 593 naactgacagtccggatgaacatcgcacttttagcataccttgatacccgactgtgcatt 652 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10872 aaactgacagtccggaggaacaacgcacttttagcataccttgatacccgactgtgcatt 10931 Query: 653 tcacacttccttaaatgtcattaacaaattttgaattcattccttattgatgtttgaaat 712 ||||||| ||| |||||||||||||||| |||||||||| |||||||||||| ||||||| Sbjct: 10932 tcacactccctaaaatgtcattaacaaa-tttgaattca-tccttattgatg-ttgaaat 10988 Query: 713 tcgaattagtggtgtagattgcccagagttggccattacagggtaaggatgttatttgca 772 ||||| |||||||||||| ||||||||| | || |||||||||||| ||||||| ||||| Sbjct: 10989 tcgaa-tagtggtgtaga-tgcccagaggttgcaattacagggtaa-gatgtta-ttgca 11044 Query: 773 agatcgatat 782 |||||||||| Sbjct: 11045 agatcgatat 11054 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7370 Number of Sequences: 1807 Number of extensions: 7370 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)