BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZF02RM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 827 0.0 >3x_Contig1770 Length = 29267 Score = 827 bits (417), Expect = 0.0 Identities = 447/453 (98%), Gaps = 3/453 (0%) Strand = Plus / Minus Query: 50 acatcgttcgattcctattaactccagattatcatcggtgaggaattatatctcaatcgg 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19119 acatcgttcgattcctattaactccagattatcatcggtgaggaattatatctcaatcgg 19060 Query: 110 atgtgctaataaaacgggcagcaggcttcttcgttccgcaggggtatcaagtcagtacaa 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19059 atgtgctaataaaacgggcagcaggcttcttcgttccgcaggggtatcaagtcagtacaa 19000 Query: 170 agatttcaggaggtttaacagttccagtaatggtaatggtaccgacaagaatgcttctgt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18999 agatttcaggaggtttaacagttccagtaatggtaatggtaccgacaagaatgcttctgt 18940 Query: 230 tgcaccgaaaactgaggtcaagaagattgttcccccaaaaccatcaactaatggtaaatc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18939 tgcaccgaaaactgaggtcaagaagattgttcccccaaaaccatcaactaatggtaaatc 18880 Query: 290 aaagactccgaccatttcggaattgcgtattatgaaagatctatttaagtatatctggcc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18879 aaagactccgaccatttcggaattgcgtattatgaaagatctatttaagtatatctggcc 18820 Query: 350 cagcggtgataacaaggtcaaaattagagtgttaattgcattggcgctattgataagtgc 409 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 18819 cagcggtgataacaaggtcaaaattagagtgttaattgcattggcgctattgataggtgc 18760 Query: 410 caagttgttgaatgttcaagttccttttttcttcaaacagaccatcgatttcgatgaata 469 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 18759 caagttgttgaatgttcaagttccttttttcttcaaacagaccatcga-ttcgatgaata 18701 Query: 470 tttgattgggttccagatgtggcttactgtgct 502 |||| |||| |||||||||||| ||||||||| Sbjct: 18700 -ttgaatggggtccagatgtggc-tactgtgct 18670 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9193 Number of Sequences: 1807 Number of extensions: 9193 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)