BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZF05FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig978 1296 0.0 >3x_Contig978 Length = 3477 Score = 1296 bits (654), Expect = 0.0 Identities = 666/670 (99%) Strand = Plus / Plus Query: 86 cgtgttgctctttagcaaagtcattgcaaagtcgatgtttttcaattcacgaccaggaat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2801 cgtgttgctctttagcaaagtcattgcaaagtcgatgtttttcaattcacgaccaggaat 2860 Query: 146 tctcaagtctctaggaatggtcgagccaacggtgtaaacaatagcatcgaacttagattt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2861 tctcaagtctctaggaatggtcgagccaacggtgtaaacaatagcatcgaacttagattt 2920 Query: 206 caattcctcatcggagatatctttaccaacctcagtgtttgtgatgaattgaacaccttc 265 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2921 caattcctcaacggagatatctttaccaacctcagtgtttgtgatgaattgaacaccttc 2980 Query: 266 ggctgctaatagatccaaacgtctttgaacaattgacttgtccaatttcatatttggaat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2981 ggctgctaatagatccaaacgtctttgaacaattgacttgtccaatttcatatttggaat 3040 Query: 326 accgtacatcaacaaaccaccgcaacgatcagccctctcgtaaacaactactgaatgacc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3041 accgtacatcaacaaaccaccgcaacgatcagccctctcgtaaacaactactgaatgacc 3100 Query: 386 agctctgttcaattggtctgcgcaagccatacctgcagggccagagccgataacggcaac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3101 agctctgttcaattggtctgcgcaagccatacctgcagggccagagccgataacggcaac 3160 Query: 446 aatcttacctgttctgacttcaggtggacaaggtttaatccatccttctttgaaagcgtt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3161 aatcttacctgttctgacttcaggtggacaaggtttaatccatccttctttgaaagcgtt 3220 Query: 506 atcgataatcaatctttcaacagacttgatgccgactggatcgtcaatgatagccaaggt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3221 atcgataatcaatctttcaacagacttgatgccgactggatcgtcaatgatagccaaggt 3280 Query: 566 acaagaaccttgacatggagcgggacaaactctaccagtaaattcagggaaattgttagt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3281 acaagaaccttgacatggagcgggacaaactctaccagtaaattcagggaaattgttagt 3340 Query: 626 ttccaatagtttgtccaatgctaatttccattggtttttgaacacaagctcattgaattt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3341 ttccaatagtttgtccaatgctaatttccattggtttttgaacacaagctcattgaattt 3400 Query: 686 tgggataatattggaaattggacatcccgtatctgatgtacagaatggaacaccacagtc 745 |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| Sbjct: 3401 tgggataatattggaaatagaacatcccgtatctgatgtacagaatgtaacaccacagtc 3460 Query: 746 catacatcta 755 |||||||||| Sbjct: 3461 catacatcta 3470 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6453 Number of Sequences: 1807 Number of extensions: 6453 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)