BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZF06FM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1751 1328 0.0 >3x_Contig1751 Length = 24682 Score = 1328 bits (670), Expect = 0.0 Identities = 774/796 (97%), Gaps = 12/796 (1%) Strand = Plus / Minus Query: 87 tcgttatttgggttgatctcaccgatctgtacccctgtagttgctgcaagctctaaatca 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18653 tcgttatttgggttgatctcaccgatctgtacccctgtagttgctgcaagctctaaatca 18594 Query: 147 tccttatcaatcgccaggaggatattatatctgtcgatacatgtttgagcaggtctaccc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18593 tccttatcaatcgccaggaggatattatatctgtcgatacatgtttgagcaggtctaccc 18534 Query: 207 atcatttcttttatgcttttccattggtttggaattcttttcgctaaatctagtagttta 266 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18533 atcatttctccgatgcttttccattggtttggaattcttttcgctaaatctagtagttta 18474 Query: 267 tcatcttcctgctggctgaatggtttgaagtttagactgggattcaaaaattcattccaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18473 tcatcttcctgctggctgaatggtttgaagtttagactgggattcaaaaattcattccaa 18414 Query: 327 cgagattgacattgcctggcattcttcttctgtagaagcgaagctactttactccatgca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18413 cgagattgacattgcctggcattcttcttctgtagaagcgaagctactttactccatgca 18354 Query: 387 tgtgttccatatttttgaacagccgcctttaatatttgatcctcaaggttcgtccaaata 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18353 tgtgttccatatttttgaacagccgcctttaatatttgatcctcaaggttcgtccaaata 18294 Query: 447 ccacctttgacataaatcggaacaggagccatcgtacgtggttaccgcctttgattaact 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18293 ccacctttgacataaatcggaacaggagccatcgtacgtggttaccgcctttgattaact 18234 Query: 507 tccctttgaaccaacgttacagctttagctgatactattattaattagtttcctatgttt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18233 tccctttgaaccaacgttacagctttagctgatactattattaattagtttcctatgttt 18174 Query: 567 ccaccaagtatatgtcaattttattttcaatccaatcccaaaattggattatctagattt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18173 ccaccaagtatatgtcaattttattttcaatccaatcccaaaattggattatctagattt 18114 Query: 627 acacagtgttataaagaaataaaacaatgtcagcgaataaagagggaactgtatccgaac 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18113 acacagtgttataaagaaataaaacaatgtcagcgaataaagagggaactgtatccgaac 18054 Query: 687 acatagtttacatattgctntactcgcaagagcataggtaccttntttcgtattatttca 746 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 18053 acatagtttacatattgctttactcgcaagagcataggtacctt-tttcgtattatttca 17995 Query: 747 gcaatgctggnatactggtttnctttttgtgactttcctccagtcaggtactttcggtct 806 |||||||||| |||||||||| ||||||||| |||||||||||| |||| |||||||| Sbjct: 17994 gcaatgctgg-atactggtttc--ttttgtgac-ttcctccagtca-gtac-ttcggtct 17941 Query: 807 ttaaactaccctatatttnattagnaatacaaacaactctgnaaattnttttcagnaaac 866 |||||||| ||||||||| ||||| ||||||| ||||||| ||||| |||||| |||| Sbjct: 17940 ttaaacta-cctatattttattag-aatacaacaaactctg-aaattc-tttcagaaaac 17885 Query: 867 acatgnacagataatg 882 ||||| |||||||||| Sbjct: 17884 acatg-acagataatg 17870 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6243 Number of Sequences: 1807 Number of extensions: 6243 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)